RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SCAIQ8N9R8 606 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 POMGNT2Q8NAT1 580 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 RBM15BQ8NDT2 890 aaKnown RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADPRHL1Q8NDY3 354 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR9K2Q8NGE7 335 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF417Q8TAU3 575 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM45BQ96B21 275 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 KTI12Q96EK9 354 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 C14orf79Q96F83 325 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 LRGUKQ96M69 825 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OXGR1Q96P68 337 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF300Q96RE9 604 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF587Q96SQ5 575 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 PRR14Q9BWN1 585 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ACTR6Q9GZN1 396 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 GORASP2Q9H8Y8 452 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 FKRPQ9H9S5 495 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 B3GAT2Q9NPZ5 323 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NANSQ9NR45 359 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 ASB6Q9NWX5 421 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 CRIM1Q9NZV1 1036 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 GPR52Q9Y2T5 361 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 MED31Q9Y3C7 131 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 NOX1Q9Y5S8 564 aa4.8□□□□□ -1.64
HMGB1P40-201ENST00000525121 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TENM4Q6N022 2769 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 LRRK2Q5S007 2527 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGKV1D-42A0A075B6H8 117 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF726A6NNF4 738 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ENO4A6NNW6 628 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF716A6NP11 495 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FTCDNL1E5RQL4 147 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ENTPD5O75356 428 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLC43A1O75387 559 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ATP5HO75947 161 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CH25HO95992 272 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADAP00813 363 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGHV3-9P01782 118 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 MT-ND1P03886 318 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 H1F0P07305 194 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADORA3P0DMS8 318 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 SAGP10523 405 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 EPXP11678 715 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 HOXB6P17509 224 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 KLK2P20151 261 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PSMB1P20618 241 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PTNP21246 168 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CBLP22681 906 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 AHCYP23526 432 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 DNAJA1P31689 397 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CRYBA2P53672 197 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 NR1H2P55055 460 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CLDN17P56750 224 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 EGR4Q05215 589 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PUDPQ08623 228 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM27E3Q08E93 113 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAPQ12884 760 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FOXD4Q12950 439 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ITGADQ13349 1161 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PIN1Q13526 163 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 POU4F3Q15319 338 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 STK11Q15831 433 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FGD3Q5JSP0 725 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FBXW9Q5XUX1 488 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR7E24Q6IFN5 339 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ALKBH2Q6NS38 261 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 NIPAL3Q6P499 406 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF474Q6S9Z5 364 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF730Q6ZMV8 503 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 BHLHA15Q7RTS1 189 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 VTCN1Q7Z7D3 282 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 P2RY8Q86VZ1 359 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 DHFR2Q86XF0 187 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 OFCC1Q8IZS5 231 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 GPR137CQ8N3F9 429 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ACBD4Q8NC06 268 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PIK3C3Q8NEB9 887 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ANKK1Q8NFD2 765 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR4D11Q8NGI4 311 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR5J2Q8NH18 312 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 LINC01560Q8TB33 94 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM239Q8WW34 195 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TAAR8Q969N4 342 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF775Q96BV0 537 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 CCDC124Q96CT7 223 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 MUCL1Q96DR8 90 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 SGTBQ96EQ0 304 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZC3HAV1LQ96H79 300 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PYURFQ96I23 114 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 PTDSS2Q9BVG9 487 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 C1orf21Q9H246 121 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 SLCO5A1Q9H2Y9 848 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ANKRD19PQ9H560 264 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 DCAF13Q9NV06 445 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms