RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLC6A13Q9NSD5 602 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LYARQ9NX58 379 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 AKAP7Q9P0M2 348 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KIAA1456Q9P272 454 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF282Q9UDV7 671 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 C3orf18Q9UK00 162 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PADI1Q9ULC6 663 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 FARSAQ9Y285 508 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 FLNAP21333 2647 aaKnown RBP2.65□□□□□ -1.98
CSDE1-208ENST00000524652 MED12LQ86YW9 2145 aa2.65□□□□□ -1.98
CSDE1-208ENST00000524652 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 A0A087WV48 116 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C1orf226A1L170 272 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 GMNCA6NCL1 334 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SAGE2PA6NJ88 616 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ARGFXA6NJG6 315 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TRPC5OSA6NMA1 111 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 B4DXG7 233 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C21orf140B9A014 251 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C9J4A7 227 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SLCO1B7G3V0H7 640 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 K7ENP7 123 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 FBP2O00757 339 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 UBDO15205 165 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TBX19O60806 448 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CTNSO60931 367 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ERAL1O75616 437 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MYO1DO94832 1006 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C6orf47O95873 294 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 IGKV3-11P04433 115 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 KLK3P07288 261 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 HEXBP07686 556 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PRKAR1AP10644 381 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PRPS2P11908 318 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ITGA2P17301 1181 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 JAK1P23458 1154 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MMP11P24347 488 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 POU1F1P28069 291 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OTX2P32243 289 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MRPL19P49406 292 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 XKP51811 444 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 EMP2P54851 167 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CLDN8P56748 225 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 HSD17B7P56937 341 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SLC26A5P58743 744 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 RPS15P62841 145 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TRA2BP62995 288 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CDC20Q12834 499 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 RAPSNQ13702 412 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SELPLGQ14242 412 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 EXOSC7Q15024 291 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 TAF11Q15544 211 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SMU1Q2TAY7 513 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 LINC00303Q3SY05 128 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 FAM174BQ3ZCQ3 159 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 GTDC1Q4AE62 458 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SFT2D3Q587I9 215 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PAGE3Q5JUK9 113 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 SPANXN4Q5MJ08 99 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C10orf62Q5T681 223 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 FHL5Q5TD97 284 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MFSD4BQ5TF39 518 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OR52E8Q6IFG1 317 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ARHGAP11AQ6P4F7 1023 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 KCTD18Q6PI47 426 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 INO80CQ6PI98 192 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PAPD4Q6PIY7 484 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 NPSR1Q6W5P4 371 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C16orf47Q6ZP98 133 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 LINGO2Q7L985 606 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OLIG3Q7RTU3 272 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PAGE2Q7Z2X7 111 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CPEB2Q7Z5Q1 589 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CAMKMTQ7Z624 323 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 MSRB3Q8IXL7 192 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 C9orf40Q8IXQ3 194 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF595Q8IYB9 648 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ST13P4Q8IZP2 240 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OR7G2Q8NG99 324 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OR9A2Q8NGT5 310 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF721Q8TF20 911 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 PSMF1Q92530 271 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 VPS33AQ96AX1 596 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 EXOSC8Q96B26 276 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 KLHL29Q96CT2 875 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 LGALS12Q96DT0 336 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 GIMAP5Q96F15 307 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 OTUB1Q96FW1 271 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 METTL2AQ96IZ6 378 aaKnown RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 IMMP1LQ96LU5 166 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF570Q96NI8 536 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 AMDHD1Q96NU7 426 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CCNL2Q96S94 520 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CCT8L2Q96SF2 557 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 INPP5KQ9BT40 448 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC28BQ9BUN5 200 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC106Q9BWC9 280 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 RSPO3Q9BXY4 272 aaPredicted RBP2.65□□□□□ -1.99
CSDE1-208ENST00000524652 NMUR2Q9GZQ4 415 aa2.65□□□□□ -1.99
CSDE1-208ENST00000524652 FAM107BQ9H098 131 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms