RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GGT2P36268 569 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
CPNE3-205ENST00000522240 FXYD6P3P58550 94 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 LTBQ06643 244 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MYBPHQ13203 477 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 FHL1Q13642 323 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 SGCBQ16585 318 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF691Q5VV52 312 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 SLX4IPQ5VYV7 408 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 SLC6A19Q695T7 634 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 SMARCD3Q6STE5 483 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 ASB18Q6ZVZ8 466 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MARVELD2Q8N4S9 558 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 C10orf53Q8N6V4 93 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 SETD9Q8NE22 299 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 OR8D4Q8NGM9 314 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 OR5J2Q8NH18 312 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MIB2Q96AX9 1013 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 ARL5BQ96KC2 179 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF570Q96NI8 536 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 ASPNQ9BXN1 380 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 PRRG3Q9BZD7 231 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 PLA2G12AQ9BZM1 189 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 PRORYQ9H606 182 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 EGLN3Q9H6Z9 239 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MCCC2Q9HCC0 563 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 MRPL39Q9NYK5 338 aaKnown RBP11.75□□□□□ -0.53
CPNE3-205ENST00000522240 TRAPPC4Q9Y296 219 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 GMPPBQ9Y5P6 360 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 HSPE1-MOB4S4R3N1 261 aa11.75□□□□□ -0.53
CPNE3-205ENST00000522240 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 K7EM74 188 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 ATXN7O15265 892 aaPredicted RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 PTP4A3O75365 173 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 ACTL6AO96019 429 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 IGHG3P01860 377 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 HIST1H2ABP04908 130 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 IMPDH2P12268 514 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 POU3F2P20265 443 aaPredicted RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 EPHA2P29317 976 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SHC1P29353 583 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 GRPRP30550 384 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SLC6A6P31641 620 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SFTPDP35247 375 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SMSP52788 366 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 CDK5Q00535 292 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 PMP22Q01453 160 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 MED21Q13503 144 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SLC10A1Q14973 349 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 PTGES3Q15185 160 aaKnown RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 PGGHGQ32M88 737 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 LINC00303Q3SY05 128 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 C1QL3Q5VWW1 255 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 C12orf73Q69YU5 71 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SLC27A4Q6P1M0 643 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 ESPNLQ6ZVH7 1005 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 HIST3H2AQ7L7L0 130 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 LSRQ86X29 649 aaPredicted RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 C8orf59Q8N0T1 100 aaPredicted RBP11.74□□□□□ -0.53
CPNE3-205ENST00000522240 LRRC17Q8N6Y2 441 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 OR2T33Q8NG76 320 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 NEIL3Q8TAT5 605 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 HIST1H2ACQ93077 130 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SAMD8Q96LT4 415 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 OR5B2Q96R09 309 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 APOL4Q9BPW4 351 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 TSSK6Q9BXA6 273 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SLC6A15Q9H2J7 730 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 TMEM185BQ9H7F4 350 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 BAIAP2Q9UQB8 552 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 COL6A6A6NMZ7 2263 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
CPNE3-205ENST00000522240 A0A1W2PNV4 684 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 M0R082 166 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 BHLHE40O14503 412 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-205ENST00000522240 CELA3AP09093 270 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 GNAO1P09471 354 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 POU1F1P28069 291 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 GRK5P34947 590 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 GIPRP48546 466 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 LHX2P50458 406 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TPD52P55327 224 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-205ENST00000522240 CDC42P60953 191 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 CSNK2A1P68400 391 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-205ENST00000522240 SLC35A1P78382 337 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 GINS1Q14691 196 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 OR7A5Q15622 319 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TMEM176BQ3YBM2 270 aaPredicted RBP11.73□□□□□ -0.53
CPNE3-205ENST00000522240 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TENM4Q6N022 2769 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 TRILQ7L0X0 811 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 GGNQ86UU5 652 aa11.73□□□□□ -0.53
CPNE3-205ENST00000522240 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms