RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SNU13P55769 128 aaKnown RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 CLDN12P56749 244 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SPOCK1Q08629 439 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 DEFB133Q30KQ1 61 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 MFSD12Q6NUT3 480 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TMPPEQ6ZT21 453 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM185AQ8NFB2 350 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 GOT1L1Q8NHS2 421 aaPredicted RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SPTSSAQ969W0 71 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 MED30Q96HR3 178 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 CCDC86Q9H6F5 360 aaKnown RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 CA14Q9ULX7 337 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PSME4Q14997 1843 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 MCM3APO60318 1980 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 FABP7O15540 132 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 C1QBP02746 253 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 GAAP10253 952 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 TSFMP43897 325 aaKnown RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF750Q32MQ0 723 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 PHOSPHO2Q8TCD6 241 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ZFAND1Q8TCF1 268 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 HDAC8Q9BY41 377 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 STRADBQ9C0K7 418 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 LCATP04180 440 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF35P13682 527 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM52BQ4KMG9 183 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 CD163Q86VB7 1156 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 LGALS14Q8TCE9 139 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 MOKQ9UQ07 419 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 SSX5O60225 188 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 TSPAN15O95858 294 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 LIPCP11150 499 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 IHHQ14623 411 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 HYAL4Q2M3T9 481 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 VASNQ6EMK4 673 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 FOXN4Q96NZ1 517 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 FN3KQ9H479 309 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 SAV1Q9H4B6 383 aaPredicted RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 EMC7Q9NPA0 242 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 SRPK3Q9UPE1 567 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 YARS2Q9Y2Z4 477 aaKnown RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 P2RX6O15547 441 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 TCRBP04435 133 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 NUDT1P36639 197 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 DCAF7P61962 342 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 YPEL5P62699 121 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 B4GALNT1Q00973 533 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ABHD12BQ7Z5M8 362 aaPredicted RBP12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF546Q86UE3 836 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 SLC35B4Q969S0 331 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 HCAR1Q9BXC0 346 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 SLC6A20Q9NP91 592 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 ENY2Q9NPA8 101 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 TM7SF3Q9NS93 570 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 FTSJ1Q9UET6 329 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 RHBDD3Q9Y3P4 386 aa12.8□□□□□ -0.36
SYNPO-205ENST00000522122 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 KDM4EB2RXH2 506 aaPredicted RBP12.79□□□□□ -0.36
SYNPO-205ENST00000522122 ETHE1O95571 254 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 LGI1O95970 557 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 BCL6P41182 706 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 ETV6P41212 452 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 C21orf58P58505 322 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 RBMS2Q15434 407 aaKnown RBP12.79□□□□□ -0.36
SYNPO-205ENST00000522122 METRNLQ641Q3 311 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 Q6ZNB5 142 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 LINC01599Q8WXQ3 324 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
SYNPO-205ENST00000522122 PLEKHJ1Q9NW61 149 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 TEX51A0A1B0GUA7 166 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 CDC14CA4D256 554 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 B4DXG7 233 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 SULT2B1O00204 365 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 CSF3P09919 207 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 MAKP20794 623 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 MAOAP21397 527 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 GZMMP51124 257 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 BTG1P62324 171 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM64Q6YI46 380 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF100Q8IYN0 542 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 FCRL1Q96LA6 429 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 VSTM5A8MXK1 200 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 FCN2Q15485 313 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 FBLIM1Q8WUP2 373 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 ZDHHC5Q9C0B5 715 aa12.79□□□□□ -0.36
SYNPO-205ENST00000522122 FANCFQ9NPI8 374 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms