RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 RIIAD1A6NNX1 92 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 B4DXG7 233 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 AIREO43918 545 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 CDC40O60508 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLN8-204ENST00000519254 SCG5P05408 212 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 LIMS3P0CW19 117 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 LIMS4P0CW20 117 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 GP1BBP13224 206 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 PTGDSP41222 190 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 CYB561P49447 251 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 QPRTQ15274 297 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 MISPQ8IVT2 679 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 KTI12Q96EK9 354 aaPredicted RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 AGAP4Q96P64 663 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 OR51E2Q9H255 320 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 PLA2G3Q9NZ20 509 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 EXOSC1Q9Y3B2 195 aaKnown RBP13.11□□□□□ -0.31
CLN8-204ENST00000519254 WIF1Q9Y5W5 379 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 SPTBN4Q9H254 2564 aa13.11□□□□□ -0.31
CLN8-204ENST00000519254 CCDC182A6NF36 153 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 PRR23D1E9PI22 279 aaPredicted RBP13.1□□□□□ -0.31
CLN8-204ENST00000519254 J3QRE1 110 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 MYL12BO14950 172 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 ASAH2BP0C7U1 165 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 PRR23D2P0DMB1 279 aaPredicted RBP13.1□□□□□ -0.31
CLN8-204ENST00000519254 MYL12AP19105 171 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 SLC2A5P22732 501 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 NOS3P29474 1203 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
CLN8-204ENST00000519254 CASRP41180 1078 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 CRMP1Q14194 572 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 CRTC2Q53ET0 693 aaPredicted RBP13.1□□□□□ -0.31
CLN8-204ENST00000519254 ARHGAP11AQ6P4F7 1023 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 SPACA3Q8IXA5 215 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 CYB561A3Q8NBI2 242 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 MOSPD2Q8NHP6 518 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 TAAR8Q969N4 342 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 UTP23Q9BRU9 249 aaKnown RBP13.1□□□□□ -0.31
CLN8-204ENST00000519254 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 MED11Q9P086 117 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 ADAM18Q9Y3Q7 739 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 HRH3Q9Y5N1 445 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 IER3IP1Q9Y5U9 82 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 CELSR3Q9NYQ7 3312 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 MED13Q9UHV7 2174 aa13.1□□□□□ -0.31
CLN8-204ENST00000519254 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CCRL2O00421 344 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 WDPCPO95876 746 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 IGHA1P01876 353 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 HIST1H1CP16403 213 aaKnown RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 ZNF3P17036 446 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CXCR1P25024 350 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CD96P40200 585 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CD79BP40259 229 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 INPP5JQ15735 1006 aaPredicted RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 OR2G6Q5TZ20 316 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 ADGRG3Q86Y34 549 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 C10orf53Q8N6V4 93 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 LRRC75AQ8NAA5 344 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 ZNF485Q8NCK3 441 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 DYNC2LI1Q8TCX1 351 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 PAQR8Q8TEZ7 354 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 SGCZQ96LD1 299 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 JSRP1Q96MG2 331 aaPredicted RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 GPX7Q96SL4 187 aaPredicted RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 TEAD3Q99594 435 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 NRIP3Q9NQ35 241 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 NANSQ9NR45 359 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 HIF3AQ9Y2N7 669 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 M0R3G1 203 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 ARPC3O15145 178 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 P04436 131 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CLUP10909 449 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 AQP2P41181 271 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 POLR2HP52434 150 aaKnown RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 WNT4P56705 351 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 PRPS1P60891 318 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 SOWAHCQ53LP3 525 aaPredicted RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 C1QL3Q5VWW1 255 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 SPINK14Q6IE38 97 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 TUBA3EQ6PEY2 450 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 POMZP3Q6PJE2 187 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms