RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TGIF2LXQ8IUE1 241 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 BCORP1Q8N888 145 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 FBXL13Q8NEE6 735 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 NFAM1Q8NET5 270 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 OR8J1Q8NGP2 316 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 NDNFQ8TB73 568 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 DTX3LQ8TDB6 740 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GIPC3Q8TF64 312 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GLYATL2Q8WU03 294 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CAPSLQ8WWF8 208 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 KIAA1143Q96AT1 154 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 FAF2Q96CS3 445 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CCDC124Q96CT7 223 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 FAM122AQ96E09 287 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CASD1Q96PB1 797 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CITED1Q99966 193 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 BPIFA3Q9BQP9 254 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 ACBD6Q9BR61 282 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CHID1Q9BWS9 393 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GON7Q9BXV9 100 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 DRC3Q9H069 523 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 OR51V1Q9H2C8 321 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RHBGQ9H310 441 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 TMEM185BQ9H7F4 350 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 APMAPQ9HDC9 416 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 ELOVL2Q9NXB9 296 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 EHFQ9NZC4 300 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GCNT4Q9P109 453 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GALPQ9UBC7 116 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 P2RX2Q9UBL9 471 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CTSFQ9UBX1 484 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CDH9Q9ULB4 789 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 PACSIN2Q9UNF0 486 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 EIF3LQ9Y262 564 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SLC22A14Q9Y267 594 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 OR10H1Q9Y4A9 318 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SF3B1O75533 1304 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 PTPRTO14522 1441 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 USP6P35125 1406 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 EFCAB5A4FU69 1503 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 XIRP1Q702N8 1843 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 A0A0A6YYH2 397 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA8QA0A0J9YX86 632 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 A0A1B0GUL7 405 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 A0A1W2PPV4 95 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 RNF222A6NCQ9 220 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 A6NJ64 397 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 A8MUA0 341 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 H3BMH7 237 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 GOLGA8RI6L899 631 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DENRO43583 198 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 FCMRO60667 390 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 STX11O75558 287 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 ERLIN2O94905 339 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 CCNB2O95067 398 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 RETP07949 1114 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 P0C879 139 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 PABPC4LP0CB38 370 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 SDC1P18827 310 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 POLR2EP19388 210 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 SRMP19623 302 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 IDSP22304 550 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DPP4P27487 766 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 CD40LGP29965 261 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 PRKAR2BP31323 418 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 ATP5C1P36542 298 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 GPR4P46093 362 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 RAB9AP51151 201 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DAOAP59103 153 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 RPS6P62753 249 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 MRPS25P82663 173 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 PLOD1Q02809 727 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 LRRC63Q05C16 580 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 PUDPQ08623 228 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 IL18R1Q13478 541 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 CYP51A1Q16850 503 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DNAL1Q4LDG9 190 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 EOGTQ5NDL2 527 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DCST2Q5T1A1 773 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF658Q5TYW1 1059 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 FAM173BQ6P4H8 233 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 BTNL3Q6UXE8 466 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 APOBEC3FQ8IUX4 373 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 LRRC34Q8IZ02 419 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 OFCC1Q8IZS5 231 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 LRRC75A-AS1Q8N1F1 130 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 OR13F1Q8NGS4 319 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF596Q8TC21 504 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 GPX8Q8TED1 209 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 RAB1CQ92928 201 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 TMEM175Q9BSA9 504 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 TUBGCP2Q9BSJ2 902 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 CNPY3Q9BT09 278 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 TMEM43Q9BTV4 400 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 DPH7Q9BTV6 452 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 BBS2Q9BXC9 721 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 IKZF5Q9H5V7 419 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 MRM3Q9HC36 420 aaKnown RBP2.68□□□□□ -1.98
VPS13B-207ENST00000518569 C8orf4Q9NR00 106 aa2.68□□□□□ -1.98
VPS13B-207ENST00000518569 IFNKQ9P0W0 207 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms