RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GLCCI1Q86VQ1 547 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 SAMD12Q8N8I0 201 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 OR52R1Q8NGF1 315 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 C15orf40Q8WUR7 153 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 MMABQ96EY8 250 aaPredicted RBP16.79■□□□□ 0.28
SDC2-202ENST00000518385 PEX11GQ96HA9 241 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 ERMAPQ96PL5 475 aaPredicted RBP16.79■□□□□ 0.28
SDC2-202ENST00000518385 MCHR1Q99705 422 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 PPIL3Q9H2H8 161 aaKnown RBP16.79■□□□□ 0.28
SDC2-202ENST00000518385 KIF25Q9UIL4 384 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 ZNF222Q9UK12 451 aa16.79■□□□□ 0.28
SDC2-202ENST00000518385 DAPL1A0PJW8 107 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 UNC119BA6NIH7 251 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 TOX3O15405 576 aaPredicted RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 PRAMEF2O60811 474 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 FZD7O75084 574 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 GATBO75879 557 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 ARL6IP5O75915 188 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 NCR1O76036 304 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 EIF4EP06730 217 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 H2AFB2P0C5Z0 115 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 GABRA3P34903 492 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 CD79BP40259 229 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 RPS7P62081 194 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 EXOSC7Q15024 291 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 GPR68Q15743 365 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 SLC30A6Q6NXT4 461 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 ADGRG3Q86Y34 549 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 LNX2Q8N448 690 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 D2HGDHQ8N465 521 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 FAM71CQ8NEG0 241 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 OR51Q1Q8NH59 317 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 TRMT10AQ8TBZ6 339 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 OIT3Q8WWZ8 545 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 OR1F2PQ96R84 312 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 UBQLN3Q9H347 655 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 PLEKHA1Q9HB21 404 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 HINT3Q9NQE9 182 aaKnown RBP16.78■□□□□ 0.28
SDC2-202ENST00000518385 C14orf105Q9NVL8 296 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 CNIH4Q9P003 139 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 MAB21L2Q9Y586 359 aa16.78■□□□□ 0.28
SDC2-202ENST00000518385 C2orf92A0A1B0GVN3 265 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 SMIM30A4D0T7 59 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 CPED1A4D0V7 1026 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 SYNDIG1LA6NDD5 238 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 APOL3O95236 402 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 TGM6O95932 706 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 PAHP00439 452 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 ZNF883P0CG24 379 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 BMP7P18075 431 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 GCGRP47871 477 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 PSMD4P55036 377 aaKnown RBP16.77■□□□□ 0.28
SDC2-202ENST00000518385 MRPS10P82664 201 aaKnown RBP16.77■□□□□ 0.28
SDC2-202ENST00000518385 AMZ1Q400G9 498 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 SLC36A2Q495M3 483 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 CDONQ4KMG0 1287 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 ELFN2Q5R3F8 820 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 GUSBP11Q6P575 273 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 GDF7Q7Z4P5 450 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 CPOQ8IVL8 374 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 LSMEM1Q8N8F7 131 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 UXS1Q8NBZ7 420 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 OR11H7Q8NGC8 314 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 HAVCR2Q8TDQ0 301 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 MAP6Q96JE9 813 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 LCORQ96JN0 433 aaPredicted RBP16.77■□□□□ 0.28
SDC2-202ENST00000518385 SLC41A2Q96JW4 573 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 CACNG6Q9BXT2 260 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 SPRTNQ9H040 489 aaPredicted RBP16.77■□□□□ 0.28
SDC2-202ENST00000518385 HEXA-AS1Q9H8Q6 139 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 CUTCQ9NTM9 273 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 NUDT15Q9NV35 164 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 RASD1Q9Y272 281 aa16.77■□□□□ 0.28
SDC2-202ENST00000518385 GPR55Q9Y2T6 319 aaPredicted RBP16.77■□□□□ 0.28
SDC2-202ENST00000518385 CPSF4LA6NMK7 179 aaKnown RBP16.77■□□□□ 0.27
SDC2-202ENST00000518385 H3BMH7 237 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 EEF1E1O43324 174 aaKnown RBP16.77■□□□□ 0.27
SDC2-202ENST00000518385 SULT1B1O43704 296 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 RAB3BP20337 219 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 DNASE1P24855 282 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 TRHRP34981 398 aaPredicted RBP16.77■□□□□ 0.27
SDC2-202ENST00000518385 EMDP50402 254 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 DHODHQ02127 395 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 FUT7Q11130 342 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 DBX2Q6ZNG2 339 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 SHFQ7M4L6 423 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 OVCH1Q7RTY7 1134 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 GRAMD2AQ8IUY3 354 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 GPR135Q8IZ08 494 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 CDK20Q8IZL9 346 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 FAM98AQ8NCA5 519 aaKnown RBP16.77■□□□□ 0.27
SDC2-202ENST00000518385 ABHD4Q8TB40 342 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 TCEAL3Q969E4 200 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 YIPF5Q969M3 257 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 G6PC3Q9BUM1 346 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 CMC2Q9NRP2 79 aa16.77■□□□□ 0.27
SDC2-202ENST00000518385 SLCO1C1Q9NYB5 712 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms