RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ISG20Q96AZ6 181 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 C1GALT1C1Q96EU7 318 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNFT2Q96EX2 444 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 SMIM8Q96KF7 97 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 APOLD1Q96LR9 279 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 FCRL5Q96RD9 977 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF382Q96SR6 550 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 UTP23Q9BRU9 249 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 SARGQ9BW04 601 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 MRPL13Q9BYD1 178 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 POLR2J2Q9GZM3 115 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLITRK2Q9H156 845 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 TLNRD1Q9H1K6 362 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABHD16BQ9H3Z7 469 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 RGCCQ9H4X1 137 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 POMKQ9H5K3 350 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 CLMPQ9H6B4 373 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF430Q9H8G1 570 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 NMRK2Q9NPI5 230 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 MKKSQ9NPJ1 570 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 LHX9Q9NQ69 397 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADARB2Q9NS39 739 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 AIG1Q9NVV5 245 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXO34Q9NWN3 711 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 MARCH5Q9NX47 278 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 GSKIPQ9P0R6 139 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 RCC2Q9P258 522 aaKnown RBP4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 HSPB7Q9UBY9 170 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 DKKL1Q9UK85 242 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 PITPNC1Q9UKF7 332 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 PADI1Q9ULC6 663 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 FZD4Q9ULV1 537 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR34Q9UPC5 381 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC7A11Q9UPY5 501 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 WIF1Q9Y5W5 379 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 DUOX1Q9NRD9 1551 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 CITO14578 2027 aa4.43□□□□□ -1.7
HMGB1P19-201ENST00000517578 LOXHD1Q8IVV2 1947 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FXYD6-FXYD2A0A087WZ82 144 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TRAV39A0A0B4J263 110 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 A0A1B0GVC2 190 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MGAT4DA6NG13 374 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ANKRD61A6NGH8 418 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNF212BA8MTL3 300 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF705EA8MWA4 302 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNASEK-C17orf49H0YIS7 233 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBFD1O14562 309 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PHOX2AO14813 284 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 AZIN1O14977 448 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SMAD9O15198 467 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 EMC8O43402 210 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 BCL2L11O43521 198 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FRS3O43559 492 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PLRG1O43660 514 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TCF21O43680 179 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TPST2O60704 377 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MOSPD3O75425 235 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NCR1O76036 304 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLCO2B1O94956 709 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBL3O95164 117 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CLDN9O95484 217 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 MLYCDO95822 493 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CYC1P08574 325 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2T7P0C7T2 308 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC25A4P12235 298 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 TPT1P13693 172 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 HSD3B1P14060 373 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 HGFP14210 728 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAHP16930 419 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 BPIP17213 487 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRKACGP22612 351 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 AKT2P31751 481 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NPBWR1P48145 328 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CEBPDP49716 269 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CAV2P51636 162 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ART1P52961 327 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 WNT3P56703 355 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NRG3P56975 720 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR4D2P58180 307 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UBE2G2P60604 165 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 H3F3AP84243 136 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CDK6Q00534 326 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF616Q08AN1 781 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 GTF2H3Q13889 308 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 HEPACAMQ14CZ8 416 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SSX1Q16384 188 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SMN1Q16637 294 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 UGT8Q16880 541 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM187BQ17R55 369 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC5A12Q1EHB4 618 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 DUOXA1Q1HG43 343 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 PTCHD3Q3KNS1 767 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ASPRV1Q53RT3 343 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 RAB6CQ53S08 254 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACTBL2Q562R1 376 aa4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 DDX60LQ5H9U9 1706 aaKnown RBP4.42□□□□□ -1.7
HMGB1P19-201ENST00000517578 NCMAPQ5T1S8 102 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 360.1 ms