RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NEU4Q8WWR8 484 aaPredicted RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 BCL2L2Q92843 193 aaPredicted RBP13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 TPK1Q9H3S4 243 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
CSGALNACT1-204ENST00000517494 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ARPC4-TTLL3A0A0A6YYG9 625 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CCDC154A6NI56 674 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 OR6C65A6NJZ3 312 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 E9PBE3 544 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 LYNX1G3V0Z9 82 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 FAAHO00519 579 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 FRS3O43559 492 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 LILRA1O75019 489 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 GSNP06396 782 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 NUDT17P0C025 328 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 LYNX1P0DP58 116 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 IL1RL1Q01638 556 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 HGFACQ04756 655 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 GSTA3Q16772 222 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 SMU1Q2TAY7 513 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 PEX5LQ8IYB4 626 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 RIBC1Q8N443 379 aaPredicted RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 HPS1Q92902 700 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 TESCQ96BS2 214 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 SLC25A36Q96CQ1 311 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 PANX1Q96RD7 426 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 PLA2G12AQ9BZM1 189 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 NARFLQ9H6Q4 476 aa13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 MTHFD2LQ9H903 347 aaPredicted RBP13.2□□□□□ -0.3
CSGALNACT1-204ENST00000517494 A8MVM7 634 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 RGS9O75916 674 aaPredicted RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ADRA2AP08913 450 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 TACSTD2P09758 323 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 MYZAPP0CAP1 466 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CREB1P16220 341 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 RPS4Y1P22090 263 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 PAX7P23759 505 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 GIFP27352 417 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CDH15P55291 814 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CLDN17P56750 224 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ARF1P84077 181 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 SNTB2Q13425 540 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CHI3L2Q15782 390 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZSWIM7Q19AV6 140 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 DPY19L1Q2PZI1 675 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 LIN52Q52LA3 116 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 COX20Q5RI15 118 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 C1orf140Q5VVS0 124 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF836Q6ZNA1 936 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF440Q8IYI8 595 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CDK20Q8IZL9 346 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 KDM8Q8N371 416 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 EIF1ADQ8N9N8 165 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 NUP37Q8NFH4 326 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 UBASH3BQ8TF42 649 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CKAP2Q8WWK9 683 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZIM3Q96PE6 472 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 PIF1Q9H611 641 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 METTL17Q9H7H0 456 aaPredicted RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CRNNQ9UBG3 495 aaPredicted RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
CSGALNACT1-204ENST00000517494 SEC14L2O76054 403 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 VAMP5O95183 116 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 AHSA1O95433 338 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 IGLV1-44P01699 117 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 LBPP18428 481 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CFPP27918 469 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CDKN2CP42773 168 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 P2RY4P51582 365 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ACTG1P63261 375 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 EPHX4Q8IUS5 362 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 OR52P1PQ8NH57 321 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 DOK1Q99704 481 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 NUF2Q9BZD4 464 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 NELFAQ9H3P2 528 aa13.18□□□□□ -0.3
CSGALNACT1-204ENST00000517494 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms