RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 AMY2BP19961 511 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 BCL6P41182 706 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 C21orf58P58505 322 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 GLO1Q04760 184 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 EIF2B1Q14232 305 aaKnown RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF77Q15935 545 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ABHD17CQ6PCB6 329 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 MEPCEQ7L2J0 689 aaKnown RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SIAH3Q8IW03 269 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR1E3Q8WZA6 343 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 DDIT4LQ96D03 193 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 DHRS9Q9BPW9 319 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 HDAC8Q9BY41 377 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 PLA2G12AQ9BZM1 189 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 PCDHB16Q9NRJ7 776 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 CUTCQ9NTM9 273 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 KCNN3Q9UGI6 736 aa10.03□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF850A8MQ14 1090 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 KDM4EB2RXH2 506 aaPredicted RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 SULT2B1O00204 365 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 CREBL2O60519 120 aaPredicted RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 EGFP01133 1207 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 ERCC1P07992 297 aaPredicted RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 SLC2A5P22732 501 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 PBX2P40425 430 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 YPEL5P62699 121 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF322Q6U7Q0 402 aaPredicted RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 OR52N1Q8NH53 320 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 CHAC2Q8WUX2 184 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 HOXB13Q92826 284 aaPredicted RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 ZNF442Q9H7R0 627 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 PTTG3PQ9NZH4 202 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 ADAM29Q9UKF5 820 aa10.02□□□□□ -0.8
PCDHGA1-202ENST00000517417 EEF1E1-BLOC1S5C9J1V9 151 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 PLA2G10O15496 165 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SRPX2O60687 465 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 GCM2O75603 506 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 APOC1P02654 83 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 PVALBP20472 110 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 CTGFP29279 349 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 HTR1FP30939 366 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 PCBP3P57721 371 aaKnown RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 TNFRSF17Q02223 184 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 TMEM201Q5SNT2 666 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 PXDC1Q5TGL8 231 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ABHD17BQ5VST6 288 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 C1orf53Q5VUE5 145 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 METRNLQ641Q3 311 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 GPR148Q8TDV2 347 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 FCRL1Q96LA6 429 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SFXN2Q96NB2 322 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 TNFRSF13CQ96RJ3 184 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 IL21Q9HBE4 155 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 TBC1D29Q9UFV1 150 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SLC35A3Q9Y2D2 325 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 KCNIP3Q9Y2W7 256 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 NPIPB8E9PQR5 432 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 H7C1C5 153 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 FFAR1O14842 300 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 BCAT2O15382 392 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 CHP2O43745 196 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SOD1P00441 154 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 GNRHRP30968 328 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 LCN6P62502 163 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 KIAA0895LQ68EN5 471 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SSX6Q7RTT6 188 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZSCAN4Q8NAM6 433 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SFXN5Q8TD22 340 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 FAM46BQ96A09 425 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ARSGQ96EG1 525 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 NUDT22Q9BRQ3 303 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ZDHHC5Q9C0B5 715 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 EPHX3Q9H6B9 360 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 FGF20Q9NP95 211 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ISYNA1Q9NPH2 558 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 REV1Q9UBZ9 1251 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ICE1Q9Y2F5 2266 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 LCATP04180 440 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SYPP08247 313 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 PDE7AQ13946 482 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 INSL4Q14641 139 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 MFSD13AQ14CX5 517 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 GLYR1Q49A26 553 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 NKAIN2Q5VXU1 208 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 FRMD1Q8N878 549 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 DUSP19Q8WTR2 217 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 ATOH1Q92858 354 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 SRPK3Q9UPE1 567 aa10.02□□□□□ -0.81
PCDHGA1-202ENST00000517417 NINQ8N4C6 2090 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 A6NCN8 305 aa10.01□□□□□ -0.81
PCDHGA1-202ENST00000517417 HRO43593 1189 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms