RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 PLAUP00749 431 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 RAF1P04049 648 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 ITGA5P08648 1049 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 CD53P19397 219 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 PTNP21246 168 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 DNASE1P24855 282 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 LTBQ06643 244 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 VEZF1Q14119 521 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 TSPO2Q5TGU0 170 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 SPNS3Q6ZMD2 512 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 CREB3L2Q70SY1 520 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 RANBP3LQ86VV4 465 aaPredicted RBP13.88□□□□□ -0.19
SERF1B-208ENST00000515588 EPHX4Q8IUS5 362 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 KDM8Q8N371 416 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 VANGL1Q8TAA9 524 aaPredicted RBP13.88□□□□□ -0.19
SERF1B-208ENST00000515588 HSD17B8Q92506 261 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 PLPPR2Q96GM1 343 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 CXXC4Q9H2H0 198 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 SLC7A10Q9NS82 523 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 PARPBPQ9NWS1 579 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 ASB6Q9NWX5 421 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 B3GAT1Q9P2W7 334 aa13.88□□□□□ -0.19
SERF1B-208ENST00000515588 VPS13CQ709C8 3753 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 CADP27708 2225 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 TRAV36DV7A0A075B6V5 113 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 FAM220BPB1ANY3 271 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 M0R082 166 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 GGT1P19440 569 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 TNFRSF1BP20333 461 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 CBLP22681 906 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 FAPQ12884 760 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 STK11Q15831 433 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 ENTPD8Q5MY95 495 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 FAM69AQ5T7M9 428 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 C8orf82Q6P1X6 216 aaPredicted RBP13.87□□□□□ -0.19
SERF1B-208ENST00000515588 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 ZNF613Q6PF04 617 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 C5orf46Q6UWT4 87 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 LINC00114Q6XXX2 140 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 WDR88Q6ZMY6 472 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 SLC15A3Q8IY34 581 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 RNF217Q8TC41 542 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 ZNF587Q96SQ5 575 aaPredicted RBP13.87□□□□□ -0.19
SERF1B-208ENST00000515588 FOXC2Q99958 501 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 USB1Q9BQ65 265 aaKnown RBP13.87□□□□□ -0.19
SERF1B-208ENST00000515588 TMEM204Q9BSN7 226 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 PCDHAC1Q9H158 963 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 RASD1Q9Y272 281 aa13.87□□□□□ -0.19
SERF1B-208ENST00000515588 GMNCA6NCL1 334 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 CPSF4LA6NMK7 179 aaKnown RBP13.86□□□□□ -0.19
SERF1B-208ENST00000515588 OR2T1O43869 369 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 RAD51DO75771 328 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 VAMP5O95183 116 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 BGLAPP02818 100 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 GRPRP30550 384 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 LGALS3BPQ08380 585 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 KEAP1Q14145 624 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 TIMM23BQ5SRD1 257 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 SWT1Q5T5J6 900 aaKnown RBP13.86□□□□□ -0.19
SERF1B-208ENST00000515588 AAED1Q7RTV5 226 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 OR2T12Q8NG77 320 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 ADAMTS16Q8TE57 1224 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 TMEM43Q9BTV4 400 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 UBTD1Q9HAC8 227 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 TAS2R16Q9NYV7 291 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 SELENONQ9NZV5 590 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 EDARQ9UNE0 448 aa13.86□□□□□ -0.19
SERF1B-208ENST00000515588 ZNF469Q96JG9 3925 aaPredicted RBP13.85□□□□□ -0.19
SERF1B-208ENST00000515588 ALPK2Q86TB3 2170 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 OR5H1A6NKK0 313 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 LRRN3E7EW58 273 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 CHP2O43745 196 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 HPRP00739 348 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 KDELR2P33947 212 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 SELENOPP49908 381 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 NR1H2P55055 460 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 GNGT1P63211 74 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 PPA1Q15181 289 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 GABRA6Q16445 453 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 ACKR1Q16570 336 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 DEFB113Q30KQ7 82 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 NCMAPQ5T1S8 102 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 C9orf135Q5VTT2 229 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
SERF1B-208ENST00000515588 H1FNTQ75WM6 255 aaPredicted RBP13.85□□□□□ -0.19
SERF1B-208ENST00000515588 CPLX4Q7Z7G2 160 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 CARM1Q86X55 608 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 MICU2Q8IYU8 434 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 OR6S1Q8NH40 331 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 RASSF5Q8WWW0 418 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 SLC41A3Q96GZ6 507 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 MUS81Q96NY9 551 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 MOGAT1Q96PD6 335 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 AMBRA1Q9C0C7 1298 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 SLCO5A1Q9H2Y9 848 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 EFCAB1Q9HAE3 211 aa13.85□□□□□ -0.19
SERF1B-208ENST00000515588 NPAP1Q9NZP6 1156 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms