RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 SDR9C7Q8NEX9 313 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 RERGQ96A58 199 aaPredicted RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 MRPS24Q96EL2 167 aaKnown RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MS4A4EQ96PG1 132 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 ATF6BQ99941 703 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 MEPEQ9NQ76 525 aaPredicted RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 NKIRAS2Q9NYR9 191 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 PURGQ9UJV8 347 aaKnown RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 PIAS3Q9Y6X2 628 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 AIPO00170 330 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 TO15178 435 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 OR10H2O60403 315 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 NGFRP08138 427 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 IL9P15248 144 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 ELK1P19419 428 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 GIFP27352 417 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 RAB40BQ12829 278 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 FZD5Q13467 585 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 CRMP1Q14194 572 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MINDY4Q4G0A6 757 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 TP53I3Q53FA7 332 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 SLC37A2Q8TED4 501 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 TMEM239Q8WW34 195 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 ZNRF4Q8WWF5 429 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MRPL15Q9P015 296 aaKnown RBP13.5□□□□□ -0.25
DDR1-271ENST00000513240 SLC22A7Q9Y694 548 aa13.5□□□□□ -0.25
DDR1-271ENST00000513240 MED12Q93074 2177 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 DAPL1A0PJW8 107 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 UNC119BA6NIH7 251 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDR1-271ENST00000513240 MYF5P13349 255 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 DRD5P21918 477 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 PSMB10P40306 273 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 FAM198BQ6UWH4 519 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 SLC22A18ASQ8N1D0 253 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 ZNF687Q8N1G0 1237 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 FOXN4Q96NZ1 517 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 CMSS1Q9BQ75 279 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 THAP7Q9BT49 309 aaPredicted RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 ALG8Q9BVK2 526 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 RNF32Q9H0A6 362 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 CACYBPQ9HB71 228 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 BABAM2Q9NXR7 383 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 RPH3AQ9Y2J0 694 aaPredicted RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 L7N2F9 121 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 IGKV1D-16P01601 117 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 RLN2P04090 185 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 TCRBP04435 133 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 ACAA1P09110 424 aaPredicted RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 GSTM3P21266 225 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 MAOAP21397 527 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 TLX1P31314 330 aaPredicted RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 ANXA11P50995 505 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 PAN3Q58A45 887 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 C3orf38Q5JPI3 329 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 RFT1Q96AA3 541 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 BPIFA2Q96DR5 249 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 NARS2Q96I59 477 aaKnown RBP13.49□□□□□ -0.25
DDR1-271ENST00000513240 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
DDR1-271ENST00000513240 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 TUBAL3A6NHL2 446 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 HPXP02790 462 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 BMP7P18075 431 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 PYCR1P32322 319 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 IFNGR2P38484 337 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 RPS15AP62244 130 aaKnown RBP13.48□□□□□ -0.25
DDR1-271ENST00000513240 MELKQ14680 651 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 NFATC4Q14934 902 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 QSOX2Q6ZRP7 698 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 POGLUT1Q8NBL1 392 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 OSTF1Q92882 214 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 NKX6-2Q9C056 277 aaPredicted RBP13.48□□□□□ -0.25
DDR1-271ENST00000513240 MTIF3Q9H2K0 278 aaKnown RBP13.48□□□□□ -0.25
DDR1-271ENST00000513240 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 CLEC1BQ9P126 229 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 GSTK1Q9Y2Q3 226 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 A0A1B0GVI7 797 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 SULT1A3P0DMM9 295 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 SULT1A4P0DMN0 295 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 CCR4P51679 360 aa13.48□□□□□ -0.25
DDR1-271ENST00000513240 DUSP8Q13202 625 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms