RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IPMKQ8NFU5 416 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 CCL4L1Q8NHW4 92 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 BLOC1S5Q8TDH9 187 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PIH1D2Q8WWB5 315 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 TMEM37Q8WXS4 190 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 OR1E3Q8WZA6 343 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PHYHIPQ92561 330 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ANP32BQ92688 251 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 PNPLA2Q96AD5 504 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 LRRC45Q96CN5 670 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 MRPL53Q96EL3 112 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 GPR137Q96N19 417 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 TSGA13Q96PP4 275 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 PANX2Q96RD6 677 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 COQ7Q99807 217 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SOSTQ9BQB4 213 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 APOL2Q9BQE5 337 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ZNF670Q9BS34 389 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 GSDMCQ9BYG8 508 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 CARD9Q9H257 536 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 FAM96AQ9H5X1 160 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 RCOR3Q9P2K3 495 aaPredicted RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 RSPH14Q9UHP6 348 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 GUCA1BQ9UMX6 200 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 NEU3Q9UQ49 428 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SLC6A5Q9Y345 797 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 SPTBN5Q9NRC6 3674 aaKnown RBP3.43□□□□□ -1.86
HTT-210ENST00000512909 F5P12259 2224 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 ABCA7Q8IZY2 2146 aa3.43□□□□□ -1.86
HTT-210ENST00000512909 NCOR1O75376 2440 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 A0A0J9YYE9 177 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 SH3PXD2BA1X283 911 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TMX2-CTNND1H3BSU7 103 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 STX7O15400 261 aaKnown RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 LRRTM2O43300 516 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TSPAN2O60636 221 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A9O60656 530 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 MTX2O75431 263 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 CDK14O94921 469 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TNFSF15O95150 251 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 IGHV3-13P01766 116 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TRBC1P01850 177 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 FGF1P05230 155 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 PBLDP30039 288 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A3P35503 534 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A5P35504 534 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 ASMTP46597 345 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 RPS4XP62701 263 aaKnown RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 CD300CQ08708 224 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 KLF5Q13887 457 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 CCDC92Q53HC0 331 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 TEX44Q53QW1 395 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TEX35Q5T0J7 233 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 SEL1L2Q5TEA6 688 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 WDR88Q6ZMY6 472 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 ADAMTSL2Q86TH1 951 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 CDKL3Q8IVW4 592 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 SYCE1Q8N0S2 351 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 HTR3CQ8WXA8 447 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 FGF11Q92914 225 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 NAT6Q93015 286 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 FAM131CQ96AQ9 280 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 DCUN1D1Q96GG9 259 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 OR2M4Q96R27 311 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 FICDQ9BVA6 458 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 RAB11FIP5Q9BXF6 653 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 EGLN1Q9GZT9 426 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 GFRA4Q9GZZ7 299 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 SLC25A51Q9H1U9 297 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 OR2AG1Q9H205 316 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 C1orf21Q9H246 121 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 LRRN3Q9H3W5 708 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 TMEM231Q9H6L2 316 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A7Q9HAW7 530 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A10Q9HAW8 530 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 UGT1A8Q9HAW9 530 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 RDH14Q9HBH5 336 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 PISDQ9UG56 409 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 DNPEPQ9ULA0 475 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.42□□□□□ -1.86
HTT-210ENST00000512909 PACSIN2Q9UNF0 486 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 RPH3AQ9Y2J0 694 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 TEX264Q9Y6I9 313 aa3.42□□□□□ -1.86
HTT-210ENST00000512909 PTPRZ1P23471 2315 aaPredicted RBP3.42□□□□□ -1.86
HTT-210ENST00000512909 hCG_1818297A0A087WSY0 165 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 A0A1B0GU03 582 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 TSPAN11A1L157 253 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ACOD1A6NK06 481 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 PDZK1P1A8MUH7 402 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 HACD1B0YJ81 288 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 PSMD11O00231 422 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 RASGRF2O14827 1237 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 ARPC1BO15143 372 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 KMOO15229 486 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 CASC3O15234 703 aaKnown RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 PSTPIP1O43586 416 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 GALR3O60755 368 aaPredicted RBP3.41□□□□□ -1.86
HTT-210ENST00000512909 SEC22BO75396 215 aa3.41□□□□□ -1.86
HTT-210ENST00000512909 IFNB1P01574 187 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms