RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 Q9N2J8 555 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 SLC52A3Q9NQ40 469 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 ZNF69Q9UC07 566 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 C19orf53Q9UNZ5 99 aaPredicted RBP7.84□□□□□ -1.15
NUP54-211ENST00000512151 A0A0G2JMP0 313 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 A0A0X1KG70 313 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 GJE1A6NN92 205 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 ZNF716A6NP11 495 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 G3V4G9 280 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 COQ9O75208 318 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 DEAF1O75398 565 aaPredicted RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 MPZL1O95297 269 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 NGFRP08138 427 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 NCF2P19878 526 aaPredicted RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 MAPK1P28482 360 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 EIF1P41567 113 aaKnown RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 MRPL19P49406 292 aaKnown RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 NCALDP61601 193 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 MYBPC1Q00872 1141 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 ZNF117Q03924 483 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 BAMBIQ13145 260 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 GSTA3Q16772 222 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 MSMPQ1L6U9 139 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 PDCD4Q53EL6 469 aaKnown RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 HIKESHIQ53FT3 197 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 CBLN3Q6UW01 205 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 TMEM107Q6UX40 140 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 FUNDC1Q8IVP5 155 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 OR7A2PQ8NGA2 310 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 OR4M2Q8NGB6 313 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 OR9I1Q8NGQ6 314 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 UBE2FQ969M7 185 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 TMIGD2Q96BF3 282 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 SLC38A2Q96QD8 506 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 REEP4Q9H6H4 257 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 ZMAT3Q9HA38 289 aaKnown RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 SLC35C2Q9NQQ7 365 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 SDR39U1Q9NRG7 319 aaPredicted RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 ZNF275Q9NSD4 429 aaPredicted RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 ATP6V1HQ9UI12 483 aa7.84□□□□□ -1.16
NUP54-211ENST00000512151 NOSIPQ9Y314 301 aaKnown RBP7.84□□□□□ -1.16
NUP54-211ENST00000512151 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 DNAH3Q8TD57 4116 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 A0A087WV62 115 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SCAMP2O15127 329 aaKnown RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 TBX19O60806 448 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ATP5HO75947 161 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 KNG1P01042 644 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ERCC1P07992 297 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 DDCP20711 480 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SLC7A1P30825 629 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SLC1A3P43003 542 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 GSTM5P46439 218 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ATP4BP51164 291 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 PSMD4P55036 377 aaKnown RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 PRSS12P56730 875 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 PRPS1P60891 318 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 NAAAQ02083 359 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 PDE7AQ13946 482 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SLC9A3R2Q15599 337 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ZNHIT3Q15649 155 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 NDUFAF6Q330K2 333 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 KPRPQ5T749 579 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 METTL21CQ5VZV1 264 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 C11orf87Q6NUJ2 197 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ACSM5Q6NUN0 579 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 RBMS3Q6XE24 437 aaKnown RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 MYPOPQ86VE0 399 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 OR2L13Q8N349 312 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 C17orf78Q8N4C9 275 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 C1orf162Q8NEQ5 155 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 FAM110DQ8TAY7 271 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 COQ8BQ96D53 544 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 OR5B2Q96R09 309 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 KATNB1Q9BVA0 655 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 DPY30Q9C005 99 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 MYLK2Q9H1R3 596 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 ZNF665Q9H7R5 613 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 DYNLRB1Q9NP97 96 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SAR1AQ9NR31 198 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 SLC7A10Q9NS82 523 aa7.83□□□□□ -1.16
NUP54-211ENST00000512151 MRTO4Q9UKD2 239 aaKnown RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 SOX21Q9Y651 276 aaPredicted RBP7.83□□□□□ -1.16
NUP54-211ENST00000512151 MYO1GB0I1T2 1018 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 J3QLI3 93 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 PPIHO43447 177 aaKnown RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 SCN2BO60939 215 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 RP2O75695 350 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 SLC22A3O75751 556 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 CECR9P0C854 216 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 LAMP1P11279 417 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 IDO1P14902 403 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 PRKCAP17252 672 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TCN1P20061 433 aaPredicted RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 NPR2P20594 1047 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 EFNA1P20827 205 aaPredicted RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 PRPS1L1P21108 318 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 GPC1P35052 558 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 PCGF2P35227 344 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms