RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	MOSPD2	Q8NHP6	518 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	RNF128	Q8TEB7	428 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	SGTB	Q96EQ0	304 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ANKRD19P	Q9H560	264 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	RNF122	Q9H9V4	155 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	CALHM2	Q9HA72	323 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	TAS2R5	Q9NYW4	299 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107		Q9UFV3	132 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	MED31	Q9Y3C7	131 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	HIVEP3	Q5T1R4	2406 aa		12.97	□□□□□ -0.33
MATR3-238	ENST00000512107	AQP7P3	A6NL99	342 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	RRP9	O43818	475 aa	Known RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	CYTIP	O60759	359 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	GAST	P01350	101 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	TP53	P04637	393 aa	Predicted RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	TSPAN19	P0C672	248 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	MAP2K6	P52564	334 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	RPS3A	P61247	264 aa	Known RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	SLC35A1	P78382	337 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	FAM69A	Q5T7M9	428 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	B3GNT6	Q6ZMB0	384 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	NUFIP2	Q7Z417	695 aa	Known RBP	12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	KIF18B	Q86Y91	864 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	C10orf53	Q8N6V4	93 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	LRRC75A	Q8NAA5	344 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	OR6S1	Q8NH40	331 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	WNT2B	Q93097	391 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	BPIFA2	Q96DR5	249 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	CCDC120	Q96HB5	630 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	HS6ST2	Q96MM7	605 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	TNFRSF13C	Q96RJ3	184 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	NIPSNAP1	Q9BPW8	284 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	PSD2	Q9BQI7	771 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	SLC19A3	Q9BZV2	496 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	MCCC2	Q9HCC0	563 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	DNAJB9	Q9UBS3	223 aa		12.96	□□□□□ -0.33
MATR3-238	ENST00000512107	TRAV27	A0A087WT01	109 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	FIGNL2	A6NMB9	653 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107		E9PLN8	166 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	PLPP3	O14495	311 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	PTP4A3	O75365	173 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	GABRA1	P14867	456 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	AQP2	P41181	271 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	KIR2DL2	P43627	348 aa	Predicted RBP	12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	GSS	P48637	474 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	MICA	Q29983	383 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	VWA1	Q6PCB0	445 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	PAQR6	Q6TCH4	344 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	THSD4	Q6ZMP0	1018 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	ATCAY	Q86WG3	371 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	TUSC5	Q8IXB3	177 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	LIPH	Q8WWY8	451 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	CPNE4	Q96A23	557 aa	Predicted RBP	12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	INTS12	Q96CB8	462 aa	Known RBP	12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	EPYC	Q99645	322 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	VKORC1	Q9BQB6	163 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	REEP1	Q9H902	201 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	CHST11	Q9NPF2	352 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	ZNF175	Q9Y473	711 aa		12.95	□□□□□ -0.34
MATR3-238	ENST00000512107	SAC3D1	A6NKF1	404 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	HNRNPR	O43390	633 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	TNFSF13	O75888	250 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	CCNB2	O95067	398 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	RCBTB2	O95199	551 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	SYNGR4	O95473	234 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	LDLR	P01130	860 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	IGF2	P01344	180 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	POU2F1	P14859	743 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	FKBP2	P26885	142 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	UQCRC1	P31930	480 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	TIMP3	P35625	211 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	CSNK2A1	P68400	391 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	LGALS3BP	Q08380	585 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	SLC17A1	Q14916	467 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	C4orf17	Q53FE4	359 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	PDSS1	Q5T2R2	415 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	C1orf94	Q6P1W5	598 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	TMPRSS11F	Q6ZWK6	438 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	H1FNT	Q75WM6	255 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	IGFN1	Q86VF2	1251 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	RNF113B	Q8IZP6	322 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	OR10G2	Q8NGC3	310 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	OR5J2	Q8NH18	312 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	OR51A7	Q8NH64	312 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	POP5	Q969H6	163 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	TXNDC15	Q96J42	360 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	ZNF385A	Q96PM9	386 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	TAPBPL	Q9BX59	468 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	FKRP	Q9H9S5	495 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	MRPL39	Q9NYK5	338 aa	Known RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	PDP1	Q9P0J1	537 aa	Predicted RBP	12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	STOML1	Q9UBI4	398 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	ZNF229	Q9UJW7	825 aa		12.94	□□□□□ -0.34
MATR3-238	ENST00000512107	RNF6	Q9Y252	685 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms