RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CBR1P16152 277 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 ADRA2CP18825 462 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 PRPH2P23942 346 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 HTR3AP46098 478 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 CCT3P49368 545 aaKnown RBP9.95□□□□□ -0.82
RNF4-216ENST00000511859 MAP2K6P52564 334 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 FOXA1P55317 472 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 CHI3L2Q15782 390 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 PAQR6Q6TCH4 344 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 EIF3MQ7L2H7 374 aaKnown RBP9.95□□□□□ -0.82
RNF4-216ENST00000511859 TREML1Q86YW5 311 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 ZIC4Q8N9L1 334 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 LRRC58Q96CX6 371 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 MTERF3Q96E29 417 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 DNAJA3Q96EY1 480 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 ZNF416Q9BWM5 594 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 ZNF275Q9NSD4 429 aaPredicted RBP9.95□□□□□ -0.82
RNF4-216ENST00000511859 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
RNF4-216ENST00000511859 NR5A2O00482 541 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 AKAP10O43572 662 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 PLPP2O43688 288 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 LYPLA1O75608 230 aaPredicted RBP9.94□□□□□ -0.82
RNF4-216ENST00000511859 ALX3O95076 343 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 LGI1O95970 557 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 HPXP02790 462 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 UBTFL6P0CB48 400 aaPredicted RBP9.94□□□□□ -0.82
RNF4-216ENST00000511859 GCH1P30793 250 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 ARR3P36575 388 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 DNAJB13P59910 316 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 TP53BP2Q13625 1128 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 DAG1Q14118 895 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 GPR68Q15743 365 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 FBLN7Q53RD9 439 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 DCAF12L2Q5VW00 463 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 FRMD7Q6ZUT3 714 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 R3HCC1LQ7Z5L2 792 aaKnown RBP9.94□□□□□ -0.82
RNF4-216ENST00000511859 OR56A1Q8NGH5 318 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 AGR3Q8TD06 166 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 DYDC1Q8WWB3 177 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 DVL3Q92997 716 aaPredicted RBP9.94□□□□□ -0.82
RNF4-216ENST00000511859 DDIT4LQ96D03 193 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 CCT7Q99832 543 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 OR11A1Q9GZK7 315 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 MED4Q9NPJ6 270 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 C1orf109Q9NX04 203 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 FIS1Q9Y3D6 152 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 CORINQ9Y5Q5 1042 aa9.94□□□□□ -0.82
RNF4-216ENST00000511859 IGHV2OR16-5A0A0B4J2B6 119 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 DUXAA6NLW8 204 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 BIRC5O15392 142 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ZNF208O43345 1280 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ITM2AO43736 263 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 STX11O75558 287 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 UGT2B17O75795 530 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 AK1P00568 194 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 CHRNGP07510 517 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 NR4A1P22736 598 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ARRB2P32121 409 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 PGM1P36871 562 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 SH3BGRP55822 239 aaPredicted RBP9.93□□□□□ -0.82
RNF4-216ENST00000511859 NAA20P61599 178 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ZP4Q12836 540 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 SNTB2Q13425 540 aaKnown RBP9.93□□□□□ -0.82
RNF4-216ENST00000511859 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 AP1ARQ63HQ0 302 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 DOK3Q7L591 496 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 OR9K2Q8NGE7 335 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 PSMA8Q8TAA3 256 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 OIT3Q8WWZ8 545 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 C22orf15Q8WYQ4 148 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 RAB39BQ96DA2 213 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ZNF385AQ96PM9 386 aaKnown RBP9.93□□□□□ -0.82
RNF4-216ENST00000511859 GPA33Q99795 319 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 C7orf69Q9H7B7 122 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 ZNF665Q9H7R5 613 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 SEC61A2Q9H9S3 476 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 TNFRSF12AQ9NP84 129 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
RNF4-216ENST00000511859 GPATCH2Q9NW75 528 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 KCNE5Q9UJ90 142 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 SLC35A3Q9Y2D2 325 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 CCL27Q9Y4X3 112 aa9.93□□□□□ -0.82
RNF4-216ENST00000511859 A0A096LPE4 126 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 A0A1W2PPZ6 126 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 SLC28A1O00337 649 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 SKAP2O75563 359 aaPredicted RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 CRCPO75575 148 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 FSHBP01225 129 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 IMPDH2P12268 514 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 SDC1P18827 310 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 TCN1P20061 433 aaPredicted RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 EFNA1P20827 205 aaPredicted RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 SLC18A1P54219 525 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 TUBA1BP68363 451 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 TUBA4AP68366 448 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 MMEL1Q495T6 779 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 OTUD3Q5T2D3 398 aaPredicted RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 TUBA1AQ71U36 451 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 CCDC36Q8IYA8 594 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms