RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 BTCP35070 178 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 SULT1E1P49888 294 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ACTR3P61158 418 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 IRX3P78415 501 aaPredicted RBP2.17□□□□□ -2.06
CHD1-207ENST00000511628 PPIL2Q13356 520 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 CTSL3PQ5NE16 218 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 C1orf100Q5SVJ3 147 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 CCDC183Q5T5S1 534 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 C1orf146Q5VVC0 180 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 C1orf94Q6P1W5 598 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ERI1Q8IV48 349 aaKnown RBP2.17□□□□□ -2.06
CHD1-207ENST00000511628 NKAPP1Q8N9T2 125 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 FAM83FQ8NEG4 500 aaPredicted RBP2.17□□□□□ -2.06
CHD1-207ENST00000511628 OR2AP1Q8NGE2 309 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 OR9A1PQ8NGU1 263 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 AKR7LQ8NHP1 331 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 LINC01006Q8NI28 216 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 BRSK1Q8TDC3 778 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 DCUN1D4Q92564 292 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 FRAT1Q92837 279 aaPredicted RBP2.17□□□□□ -2.06
CHD1-207ENST00000511628 TUBGCP3Q96CW5 907 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 CXorf40BQ96DE9 158 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 SEC22AQ96IW7 307 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 SMIM14Q96QK8 99 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 NAT9Q9BTE0 207 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 CHRDL1Q9BU40 450 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ACTR6Q9GZN1 396 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 PPA2Q9H2U2 334 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ANKRD19PQ9H560 264 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 ZDHHC11Q9H8X9 412 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 NMRAL1Q9HBL8 299 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 PISDQ9UG56 409 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 SUN2Q9UH99 717 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 COPS3Q9UNS2 423 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 RPL36Q9Y3U8 105 aaKnown RBP2.17□□□□□ -2.06
CHD1-207ENST00000511628 SH3TC1Q8TE82 1336 aa2.17□□□□□ -2.06
CHD1-207ENST00000511628 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 PCP4L1A6NKN8 68 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 OR5B21A6NL26 309 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 USP27XA6NNY8 438 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 E9PBE3 544 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 HIP1O00291 1037 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 TRAF3IP2O43734 574 aaPredicted RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 MMP23AO75900 390 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 ACTL6AO96019 429 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 NCF2P19878 526 aaPredicted RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 MX1P20591 662 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 HNRNPH3P31942 346 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 SELENOTP62341 195 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 RPL23AP62750 156 aaKnown RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 OGDHQ02218 1023 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 OR5I1Q13606 314 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 ZNF77Q15935 545 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 IL17AQ16552 155 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 CCDC14Q49A88 953 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 C6orf226Q5I0X4 101 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 TIGD3Q6B0B8 471 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 C11orf71Q6IPW1 123 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 HSDL2Q6YN16 418 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 TIFABQ6ZNK6 161 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 C19orf35Q6ZS72 473 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 H2BFWTQ7Z2G1 175 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 NBPF5PQ86XG9 351 aaPredicted RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 PIANPQ8IYJ0 282 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 TPRX1Q8N7U7 411 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 ACOT4Q8N9L9 421 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 OR2L3Q8NG85 312 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 ZNF641Q96N77 438 aaPredicted RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 SELENOIQ9C0D9 397 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 ZFP14Q9HCL3 533 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 SH2D2AQ9NP31 389 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 AIG1Q9NVV5 245 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 BFARQ9NZS9 450 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 NAP1L2Q9ULW6 460 aaPredicted RBP2.16□□□□□ -2.06
CHD1-207ENST00000511628 TRAF3IP3Q9Y228 551 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 IKBKGQ9Y6K9 419 aa2.16□□□□□ -2.06
CHD1-207ENST00000511628 LOC110117498-PIK3R3F6TDL0 507 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 KRTAP4-16G5E9R7 235 aaPredicted RBP2.15□□□□□ -2.07
CHD1-207ENST00000511628 PANO1I0J062 215 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 AP3B1O00203 1094 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 EMC8O43402 210 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 NPIPB7O75200 414 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 OR7A10O76100 309 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 SNAPINO95295 136 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 C1orf105O95561 183 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 KRT6AP02538 564 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 MMP1P03956 469 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 IGKV3-11P04433 115 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 P04436 131 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 ELK1P19419 428 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 CD1BP29016 333 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 CD1CP29017 333 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 RFC4P35249 363 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 KIR2DS4P43632 304 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 VDAC2P45880 294 aaPredicted RBP2.15□□□□□ -2.07
CHD1-207ENST00000511628 GPM6AP51674 278 aa2.15□□□□□ -2.07
CHD1-207ENST00000511628 KPNA2P52292 529 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms