RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 BLOC1S5-TXNDC5H3BN57 136 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 SEC14L5O43304 696 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 TRMUO75648 421 aaKnown RBP13.74□□□□□ -0.21
SCLT1-209ENST00000511426 IGHMP01871 453 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 MYL12AP19105 171 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 CNR1P21554 472 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 DPP4P27487 766 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
SCLT1-209ENST00000511426 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
SCLT1-209ENST00000511426 LCN1P1Q5VSP4 162 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 POMZP3Q6PJE2 187 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 CPOQ8IVL8 374 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 DOK1Q99704 481 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 INPP5EQ9NRR6 644 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 ALKBH4Q9NXW9 302 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 LRFN1Q9P244 771 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-209ENST00000511426 TRAPPC4Q9Y296 219 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 B3GALT5Q9Y2C3 310 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 IER3IP1Q9Y5U9 82 aa13.74□□□□□ -0.21
SCLT1-209ENST00000511426 SPEGQ15772 3267 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 PCSK5Q92824 1860 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 GJE1A6NN92 205 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 OR6A2O95222 327 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 ADORA3P0DMS8 318 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 CCNA2P20248 432 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 AQP2P41181 271 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 CAPZA2P47755 286 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-209ENST00000511426 CRMP1Q14194 572 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 SLC35F1Q5T1Q4 408 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF468Q5VIY5 522 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-209ENST00000511426 FAM205BPQ63HN1 556 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 PLBD1Q6P4A8 553 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 GALNT16Q8N428 558 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 SLC37A3Q8NCC5 494 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF248Q8NDW4 579 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 OR52I1Q8NGK6 324 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 POC1BQ8TC44 478 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 RAB2BQ8WUD1 216 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 MYCBPQ99417 103 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-209ENST00000511426 PIGQQ9BRB3 760 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 GRHPRQ9UBQ7 328 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 COMMD3-BMI1R4GMX3 469 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 PTPRBP23467 1997 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 MUC6Q6W4X9 2439 aa13.73□□□□□ -0.21
SCLT1-209ENST00000511426 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 CCDC160A6NGH7 325 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 LINC01387J3KSC0 135 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 SLC2A10O95528 541 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 HIST1H1CP16403 213 aaKnown RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 GRPRP30550 384 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 CENPAP49450 140 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 SLC25A1P53007 311 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 CTXN1P60606 82 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 AGAP7PQ5VUJ5 663 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 MDGA2Q7Z553 956 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 OR52E2Q8NGJ4 325 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 TMIGD2Q96BF3 282 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 LGALS12Q96DT0 336 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 AGAP4Q96P64 663 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 FAM173AQ9BQD7 235 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 INIPQ9NRY2 104 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 DKKL1Q9UK85 242 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 KNTC1P50748 2209 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 A0A1W2PNV4 684 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF891A8MT65 544 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 PLPP3O14495 311 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 MYL12BO14950 172 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 DNPH1O43598 174 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 GFRA3O60609 400 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 IGHA1P01876 353 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 SLC2A5P22732 501 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 MLLT10P55197 1068 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 GP2P55259 537 aaKnown RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ACTC1P68032 377 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ACTA1P68133 377 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 GGTLC2Q14390 218 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 TGIF1Q15583 401 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 SLC6A19Q695T7 634 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 TUBA3EQ6PEY2 450 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 H1FNTQ75WM6 255 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 JAZF1Q86VZ6 243 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF227Q86WZ6 799 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 MARCH9Q86YJ5 346 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 ANKRD13BQ86YJ7 626 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 CLVS1Q8IUQ0 354 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-209ENST00000511426 POMGNT2Q8NAT1 580 aa13.72□□□□□ -0.21
SCLT1-209ENST00000511426 NPEPL1Q8NDH3 523 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms