RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IMPDH2P12268 514 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 ZNF43P17038 809 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 TNFRSF1BP20333 461 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 UQCRC1P31930 480 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 IL1RL1Q01638 556 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 EGR4Q05215 589 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 PIN1Q13526 163 aaPredicted RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 POU4F3Q15319 338 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 FAM98BQ52LJ0 330 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 VWA1Q6PCB0 445 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 LINC00114Q6XXX2 140 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 H1FNTQ75WM6 255 aaPredicted RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 SSX8Q7RTT4 187 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 HDDC2Q7Z4H3 204 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 GDF7Q7Z4P5 450 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 ABHD12BQ7Z5M8 362 aaPredicted RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 BTLAQ7Z6A9 289 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 LUZP2Q86TE4 346 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 GPAT4Q86UL3 456 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 RBM45Q8IUH3 476 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 LIX1LQ8IVB5 337 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 TUSC5Q8IXB3 177 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 ZNF100Q8IYN0 542 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 RNF113BQ8IZP6 322 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 PIK3C3Q8NEB9 887 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 OR4D11Q8NGI4 311 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 TMEM239Q8WW34 195 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 APH1AQ96BI3 265 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 KTI12Q96EK9 354 aaPredicted RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 WFDC6Q9BQY6 131 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 PRR14Q9BWN1 585 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 HDHD5Q9BXW7 423 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 RSPO3Q9BXY4 272 aaPredicted RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 UCK2Q9BZX2 261 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 AMBRA1Q9C0C7 1298 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 YY1AP1Q9H869 796 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 MRPL39Q9NYK5 338 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 GMPR2Q9P2T1 348 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 NDRG3Q9UGV2 375 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 ZNF229Q9UJW7 825 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 TMEM5Q9Y2B1 443 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 IGKV1D-42A0A075B6H8 117 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 LOC102725191A0A1B0GVB3 256 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 A0A1W2PRQ8 180 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 AQP12BA6NM10 295 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 FTCDNL1E5RQL4 147 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 M0R082 166 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PDE5AO76074 875 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 AKR7A3O95154 331 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 GOSR1O95249 250 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 FABP3P05413 133 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 H1F0P07305 194 aaKnown RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 UMPSP11172 480 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 POU2F1P14859 743 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PPP3CBP16298 524 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 MSX2P35548 267 aaPredicted RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 IFNGR2P38484 337 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 CHRNB3Q05901 458 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 TFF3Q07654 80 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PUDPQ08623 228 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PMS2P3Q13401 168 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 C1DQ13901 141 aaKnown RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 DGCR6Q14129 220 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 FLOT2Q14254 428 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 SLC17A1Q14916 467 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 P2RY6Q15077 328 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 CDSNQ15517 529 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 ANKDD1AQ495B1 522 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 ZNF730Q6ZMV8 503 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 Q6ZT83 130 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 AQP12AQ8IXF9 295 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 TMEM99Q8N816 258 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 OR9K2Q8NGE7 335 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 ZNF417Q8TAU3 575 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 ACOT11Q8WXI4 607 aaPredicted RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 TAAR8Q969N4 342 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 TMEM45BQ96B21 275 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 SGTBQ96EQ0 304 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 DNAJA3Q96EY1 480 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 OXGR1Q96P68 337 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 ZNF300Q96RE9 604 aaPredicted RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 ZNF587Q96SQ5 575 aaPredicted RBP8.13□□□□□ -1.11
NUP54-207ENST00000508583 PIP5K1AQ99755 562 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 PTDSS2Q9BVG9 487 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 OR10A4Q9H209 315 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 LRMDAQ9H2I8 198 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 IL1RAPQ9NPH3 570 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 GALNT8Q9NY28 637 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 NDUFAF4Q9P032 175 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 CLEC4AQ9UMR7 237 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 A4GNTQ9UNA3 340 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 RCE1Q9Y256 329 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
NUP54-207ENST00000508583 SETXQ7Z333 2677 aaKnown RBP8.12□□□□□ -1.11
NUP54-207ENST00000508583 TUBAL3A6NHL2 446 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 ZNF716A6NP11 495 aa8.12□□□□□ -1.11
NUP54-207ENST00000508583 C16orf97H3BN30 126 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms