RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 EIF5AL1Q6IS14 154 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 RPS19BP1Q86WX3 136 aaKnown RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 FOXRED2Q8IWF2 684 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MKXQ8IYA7 352 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 CCDC36Q8IYA8 594 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ZBTB34Q8NCN2 500 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 OR5AK3PQ8NH89 298 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TSPEARQ8WU66 669 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 LRTOMTQ8WZ04 291 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 C11orf40Q8WZ69 217 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 OR5P2Q8WZ92 322 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 LPGAT1Q92604 370 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 AKAP1Q92667 903 aaKnown RBP eCLIP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ESAMQ96AP7 390 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 SLC45A3Q96JT2 553 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 NKX3-1Q99801 234 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 GINS3Q9BRX5 216 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 P2RY12Q9H244 342 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 DCLRE1BQ9H816 532 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 GNB4Q9HAV0 340 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF701Q9NV72 531 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 TEX10Q9NXF1 929 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-208ENST00000508342 MED11Q9P086 117 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 BAIAP2Q9UQB8 552 aa2.73□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV1-45A0A0A0MS14 117 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FAM240BA0A1B0GVZ2 78 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 F5H5K5 113 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GPR171O14626 319 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ABCD4O14678 606 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR2T1O43869 369 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PRKD3O94806 890 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CD3EP07766 207 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 THRBP10828 461 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IFI30P13284 250 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF44P15621 663 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ST6GAL1P15907 406 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 STOMP27105 288 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SEC24CP53992 1094 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 BIDP55957 195 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 RPL23AP62750 156 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HOXA4Q00056 320 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TNFRSF17Q02223 184 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GAB1Q13480 694 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 QPRTQ15274 297 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 VAMP3Q15836 100 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FRMPD2BQ6IN97 320 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ARHGAP11AQ6P4F7 1023 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IGF2-ASQ6U949 168 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 KLBQ86Z14 1044 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FAM217AQ8IXS0 508 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF740Q8NDX6 193 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 OR4K15Q8NH41 348 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 AENQ8WTP8 325 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 C15orf40Q8WUR7 153 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 S100ZQ8WXG8 99 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SENP5Q96HI0 755 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF583Q96ND8 569 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CCDC115Q96NT0 180 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZIM3Q96PE6 472 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM100Q9NV29 134 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MYRFQ9Y2G1 1151 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PCDHA9Q9Y5H5 950 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 KLF2Q9Y5W3 355 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 A0A087WXM4 84 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF850A8MQ14 1090 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 BBIP1A8MTZ0 92 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF587BE7ETH6 402 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 H0YAE9 185 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NRG2O14511 850 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SPINT1O43278 529 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PPIHO43447 177 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 SCO1O75880 301 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 FAM155BO75949 473 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IGHA2P01877 340 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ETS2P15036 469 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PRKCAP17252 672 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IL11P20809 199 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 EVI2BP34910 448 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 HMGCLP35914 325 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PSMB10P40306 273 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 EIF2B2P49770 351 aaKnown RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF140P52738 457 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NRF1Q16656 503 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NHSL2Q5HYW2 709 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF17Q5VTA0 474 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 PLEKHG7Q6ZR37 379 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 LINGO2Q7L985 606 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 MRGPRGQ86SM5 289 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT10Q86SR1 603 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CROCCP3Q8IVE0 287 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf87Q8N0U7 546 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 DTX3Q8N9I9 347 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 BANPQ8N9N5 519 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 INO80EQ8NBZ0 244 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-208ENST00000508342 NUP37Q8NFH4 326 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNT7Q8NFL0 401 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 IL17RDQ8NFM7 739 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 ABHD11Q8NFV4 315 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 CCDC107Q8WV48 283 aa2.72□□□□□ -1.97
NEDD4-208ENST00000508342 KISS1RQ969F8 398 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms