RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RALGPS2Q86X27 583 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 ECHDC2Q86YB7 292 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 PIANPQ8IYJ0 282 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 FAM83FQ8NEG4 500 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 TRPV1Q8NER1 839 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 OR13C2Q8NGS9 318 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ARPC1AQ92747 370 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ITCHQ96J02 903 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 P2RY13Q9BPV8 354 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 NAT9Q9BTE0 207 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 GCOM2Q9BZD3 368 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 POLR2J2Q9GZM3 115 aaKnown RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 POLR2J3Q9H1A7 115 aaKnown RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 NXF3Q9H4D5 531 aaKnown RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 NARFLQ9H6Q4 476 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 SGK2Q9HBY8 427 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 SEC14L3Q9UDX4 400 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 KCNIP3Q9Y2W7 256 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ZNF646O15015 1829 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 PLEKHG1Q9ULL1 1385 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 FRMPD3Q5JV73 1810 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 IGLV3-22A0A075B6J6 115 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 ARHGEF35A5YM69 484 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 RBMY1BA6NDE4 496 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 RBMY1EA6NEQ0 496 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 HIP1O00291 1037 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 FAM189A1O60320 539 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 BBOX1O75936 387 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 RBMY1DP0C7P1 496 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 RBMY1A1P0DJD3 496 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 ATP1B2P14415 290 aaPredicted RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 ZNF17P17021 662 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 CCNE1P24864 410 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 DLX1P56177 255 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 PRPS1P60891 318 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 BST1Q10588 318 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 OR5I1Q13606 314 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 DDX39BQ13838 428 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 ZMYND11Q15326 602 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 NSDHLQ15738 373 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 DGUOKQ16854 277 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 MICBQ29980 383 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 PAGE3Q5JUK9 113 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 SAMD4BQ5PRF9 694 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 TMIGD1Q6UXZ0 262 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 HSDL2Q6YN16 418 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 MFSD6LQ8IWD5 586 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 PNKDQ8N490 385 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 SUMF2Q8NBJ7 301 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 SDR9C7Q8NEX9 313 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 OR9G1Q8NH87 305 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 MYDGFQ969H8 173 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.31□□□□□ -2.04
LSM6-205ENST00000507449 CXorf40BQ96DE9 158 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 PANX2Q96RD6 677 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 FMO2Q99518 471 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 FAIM2Q9BWQ8 316 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 HES7Q9BYE0 225 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 ACTR6Q9GZN1 396 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 ANKRD19PQ9H560 264 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 NMRAL1Q9HBL8 299 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 COX16Q9P0S2 106 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 NYAP2Q9P242 653 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 MTRF1LQ9UGC7 380 aaKnown RBP2.31□□□□□ -2.04
LSM6-205ENST00000507449 TRAF3IP3Q9Y228 551 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 ASF1AQ9Y294 204 aa2.31□□□□□ -2.04
LSM6-205ENST00000507449 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 SYNJ2BP-COX16A0A087WUM0 186 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 WI2-2373I1.2A0A1W2PRP0 233 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 OR5B21A6NL26 309 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 HAS3O00219 553 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 MPHOSPH10O00566 681 aaKnown RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 MOSP00540 346 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 SERPINA3P01011 423 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 KLK3P07288 261 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 IL12AP29459 219 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 VDAC2P45880 294 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 GPM6AP51674 278 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 WNT4P56705 351 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 TAS2R19P59542 299 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 IRX3P78415 501 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 OGDHQ02218 1023 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 PPIL2Q13356 520 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ATP6AP1Q15904 470 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ZNF77Q15935 545 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 C2orf83Q53S99 150 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 C6orf226Q5I0X4 101 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 CTSL3PQ5NE16 218 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ACP7Q6ZNF0 438 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 RNF165Q6ZSG1 346 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 H2BFWTQ7Z2G1 175 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ZNF571Q7Z3V5 609 aaPredicted RBP2.3□□□□□ -2.04
LSM6-205ENST00000507449 ZNF546Q86UE3 836 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 Q8N7P7 452 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 TPRX1Q8N7U7 411 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 ACOT4Q8N9L9 421 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 DCAF4L2Q8NA75 395 aa2.3□□□□□ -2.04
LSM6-205ENST00000507449 OR1L6Q8NGR2 347 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms