RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 H7C417 338 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 SPINT1O43278 529 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GLSO94925 669 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GPR1P46091 355 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 FNTBP49356 437 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 PRMT2P55345 433 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 DUSP8Q13202 625 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 ZIC1Q15915 447 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 TCTN1Q2MV58 587 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 NDUFAF6Q330K2 333 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GLB1L2Q8IW92 636 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 CDK20Q8IZL9 346 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 POMGNT2Q8NAT1 580 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 TMIEQ8NEW7 156 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 OR51A7Q8NH64 312 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 SNX33Q8WV41 574 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 CNN2Q99439 309 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 RSPH9Q9H1X1 276 aaPredicted RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 MTFP1Q9UDX5 166 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 ERVK-19Q9WJR5 959 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 A0A0D9SG52 128 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 STATHP02808 62 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 RORAP35398 523 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 PSMB10P40306 273 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 FGL2Q14314 439 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GGTLC2Q14390 218 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GAS6Q14393 721 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 PCGF3Q3KNV8 242 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 LDLRAD3Q86YD5 345 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 PUSL1Q8N0Z8 303 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 MS4A6EQ96DS6 147 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 NARS2Q96I59 477 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 C10orf90Q96M02 699 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 MACROD1Q9BQ69 325 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 WDR13Q9H1Z4 485 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 PIGMQ9H3S5 423 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF768Q9H5H4 540 aaKnown RBP15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 BIN3Q9NQY0 253 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 C2orf42Q9NWW7 574 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 ETV7Q9Y603 341 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 GPR31O00270 319 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ERI3O43414 337 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 SOD2P04179 222 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 THBS1P07996 1170 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 GKN3PP0CG01 181 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 SYN1P17600 705 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 CCDC157Q569K6 752 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 MFSD12Q6NUT3 480 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ABHD17CQ6PCB6 329 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 TMEM88Q6PEY1 159 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 FAM111BQ6SJ93 734 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF546Q86UE3 836 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 SLC35F2Q8IXU6 374 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 OR2L13Q8N349 312 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 LINC01555Q8NAE3 123 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 TMEM185AQ8NFB2 350 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 NUS1Q96E22 293 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 LRIG1Q96JA1 1093 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 C6orf106Q9H6K1 298 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 MEPEQ9NQ76 525 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 EPHA6Q9UF33 1036 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 DISC1C4P0D8 188 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 RBBP9O75884 186 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 TMIGD3P0DMS9 266 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 MAGEB1P43366 347 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 STARP49675 285 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 SERTAD2Q14140 314 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ARHGAP11BQ3KRB8 267 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 C11orf88Q6PI97 169 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 CCDC36Q8IYA8 594 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 OR4D10Q8NGI6 311 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ASB12Q8WXK4 309 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 RGP1Q92546 391 aaPredicted RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 TSNAXQ99598 290 aaKnown RBP15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 TMEM138Q9NPI0 162 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 PRSS16Q9NQE7 514 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 NCDNQ9UBB6 729 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF281Q9Y2X9 895 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 MED31Q9Y3C7 131 aa15.69■□□□□ 0.1
SQSTM1-211ENST00000506690 IFNGP01579 166 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 AGTR1P30556 359 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 NAA10P41227 235 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 JMJD6Q6NYC1 403 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 ARHGAP11AQ6P4F7 1023 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 HAGHLQ6PII5 290 aaPredicted RBP15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 DND1Q8IYX4 353 aaKnown RBP15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 SVBPQ8N300 66 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 KCNRGQ8N5I3 272 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 SLC23A2Q9UGH3 650 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 SERTAD3Q9UJW9 196 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 TMEM218A2RU14 115 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 VEGFDO43915 354 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 AGR2O95994 175 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 RPN2P04844 631 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 ITPKBP27987 946 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 RFC3P40938 356 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 AMZ1Q400G9 498 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 LY6G6FQ5SQ64 297 aa15.68■□□□□ 0.1
SQSTM1-211ENST00000506690 ZNF765Q7L2R6 523 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms