RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TMEM225Q6GV28 225 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 KLHL24Q6TFL4 600 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 DHDDSQ86SQ9 333 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 VRK2Q86Y07 508 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF433Q8N7K0 673 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 BBS10Q8TAM1 723 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 GTF2H4Q92759 462 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 SLC35B4Q969S0 331 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 MCUR1Q96AQ8 359 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 LRRC58Q96CX6 371 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 DNAJA3Q96EY1 480 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 TMEM19Q96HH6 336 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 COX4I2Q96KJ9 171 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 SPATA5L1Q9BVQ7 753 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 SPATA9Q9BWV2 254 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ADAM19Q9H013 955 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 PIF1Q9H611 641 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ZNF701Q9NV72 531 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 MALT1Q9UDY8 824 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 POU2F3Q9UKI9 436 aa9.2□□□□□ -0.94
NR1I3-222ENST00000506018 MAGED1Q9Y5V3 778 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-222ENST00000506018 ABCD4O14678 606 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SMAD7O15105 426 aaKnown RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 ADAM11O75078 769 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 KRT33AO76009 404 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 GKN3PP0CG01 181 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 PTAFRP25105 342 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 MVDP53602 400 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 CDH11P55287 796 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 GUCA2AQ02747 115 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 RGNQ15493 299 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 OR7A5Q15622 319 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SPATS1Q496A3 300 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 LRIF1Q5T3J3 769 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 AGAP6Q5VW22 663 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SLC2A7Q6PXP3 512 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 KRT73Q86Y46 540 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 CCDC103Q8IW40 242 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 PGAM4Q8N0Y7 254 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 C17orf78Q8N4C9 275 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 POMGNT2Q8NAT1 580 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 C1orf162Q8NEQ5 155 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 KBTBD8Q8NFY9 601 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 OR8J3Q8NGG0 315 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 TMEM45BQ96B21 275 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 AURKBQ96GD4 344 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 BARX1Q9HBU1 254 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 A4GALTQ9NPC4 353 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SPAG4Q9NPE6 437 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SLC52A3Q9NQ40 469 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SLC6A13Q9NSD5 602 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 RLIMQ9NVW2 624 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 CISD1Q9NZ45 108 aaKnown RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 SELENONQ9NZV5 590 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 PRPF19Q9UMS4 504 aaKnown RBP9.19□□□□□ -0.94
NR1I3-222ENST00000506018 AMDHD2Q9Y303 409 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 PCDHB14Q9Y5E9 798 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 FLVCR1Q9Y5Y0 555 aa9.19□□□□□ -0.94
NR1I3-222ENST00000506018 PLCE1Q9P212 2302 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 DPRXA6NFQ7 191 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 OR6C65A6NJZ3 312 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 LIPT2A6NK58 231 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 FBP2O00757 339 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 DNAJC8O75937 253 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 AHSA1O95433 338 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 STAMBPO95630 424 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 WNT11O96014 354 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 C1QCP02747 245 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 IMPDH2P12268 514 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 BMP4P12644 408 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 ETS2P15036 469 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 PAX7P23759 505 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 ACAA2P42765 397 aaKnown RBP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 NCALDP61601 193 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 PPP2R2BQ00005 443 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 PLAURQ03405 335 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 CEACAM7Q14002 265 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 SLC17A1Q14916 467 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 NRF1Q16656 503 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 GTDC1Q4AE62 458 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 RPS26P11Q5JNZ5 115 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 PAGE3Q5JUK9 113 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 SLC22A25Q6T423 547 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 C5orf46Q6UWT4 87 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 GPAT4Q86UL3 456 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 DEFB107AQ8IZN7 70 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 BHLHE22Q8NFJ8 381 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-222ENST00000506018 OR52N5Q8NH56 324 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 IGFBPL1Q8WX77 278 aa9.18□□□□□ -0.94
NR1I3-222ENST00000506018 HS6ST2Q96MM7 605 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms