RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RSRP1Q9BUV0 290 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 MS4A8Q9BY19 250 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 DNTTIP1Q9H147 329 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ADGRL4Q9HBW9 690 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SPHK2Q9NRA0 654 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 PTTG3PQ9NZH4 202 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 IKZF2Q9UKS7 526 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 EXOGQ9Y2C4 368 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TCF20Q9UGU0 1960 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 DOCK9Q9BZ29 2069 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 A0A1B0GV50 99 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TVP23AA6NH52 213 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 GRXCR1A8MXD5 290 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SYT5O00445 386 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 PLPP2O43688 288 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 LY86O95711 162 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 PAK4O96013 591 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 CRYBA1P05813 215 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 GIPP09681 153 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 BDKRB2P30411 391 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 NPBWR1P48145 328 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 PRLHRP49683 370 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 MEOX2P50222 304 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 RAB13P51153 203 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 EPHA4P54764 986 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 DLX5P56178 289 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 POLR2GP62487 172 aaKnown RBP eCLIP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 BTN3A2P78410 334 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF234Q14588 700 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 OR4C11Q6IEV9 310 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 OR10K2Q6IF99 312 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 FAM199XQ6PEV8 388 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 POMZP3Q6PJE2 187 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 GLB1L2Q8IW92 636 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 C10orf53Q8N6V4 93 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SLC22A8Q8TCC7 542 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZPLD1Q8TCW7 415 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 KISS1RQ969F8 398 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF689Q96CS4 500 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 NUS1Q96E22 293 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 HSPA12BQ96MM6 686 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TCF7L1Q9HCS4 588 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 C2orf42Q9NWW7 574 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 CLDND1Q9NY35 253 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 OR5V1Q9UGF6 321 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 CDV3Q9UKY7 258 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 NOP16Q9Y3C1 178 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 IER3IP1Q9Y5U9 82 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TRPM7Q96QT4 1865 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3DA0A087WVF3 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3IA0A087WXS9 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3EA0A087X179 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3KA0A087X1G2 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM272A0A1B0GTI8 110 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 A0A1B0GUH1 482 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SERTM1A2A2V5 107 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3FA6NER0 549 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 OR2AT4A6NND4 320 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3LB9A6J9 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SOX1O00570 391 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 EIF3GO75821 320 aaKnown RBP eCLIP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 RBBP9O75884 186 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 AIFM1O95831 613 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TGM6O95932 706 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 HPP00738 406 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3HP0C7X1 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 FPR3P25089 353 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SIRPAP78324 504 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 BAMBIQ13145 260 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 RAB33AQ14088 237 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SLC25A30Q5SVS4 291 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF626Q68DY1 528 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3GQ6DHY5 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3CQ6IPX1 549 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 H3F3CQ6NXT2 135 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 MBOAT2Q6ZWT7 520 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZNF627Q7L945 461 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM200AQ86VY9 491 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 CDK20Q8IZL9 346 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TBC1D3Q8IZP1 549 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZSCAN1Q8NBB4 408 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TMEM239Q8WW34 195 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 GIMAP5Q96F15 307 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 Q96M85 177 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 VRK1Q99986 396 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 C20orf24Q9BUV8 137 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SGPP1Q9BX95 441 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 C1QTNF2Q9BXJ5 285 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ZDHHC5Q9C0B5 715 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 TLNRD1Q9H1K6 362 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 CHRDQ9H2X0 955 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 HRH4Q9H3N8 390 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 SRA1Q9HD15 236 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 ACSS1Q9NUB1 689 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 PRR13Q9NZ81 148 aa7.01□□□□□ -1.29
NEDD9-208ENST00000504387 MRPS23Q9Y3D9 190 aaKnown RBP7.01□□□□□ -1.29
NEDD9-208ENST00000504387 KANTRA0A1W2PQU2 76 aa7□□□□□ -1.29
NEDD9-208ENST00000504387 IFITM5A6NNB3 132 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms