RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FAPQ12884 760 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 SELPLGQ14242 412 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 STK11Q15831 433 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 AGKQ53H12 422 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 RUNDC3AQ59EK9 446 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 GCNT6Q5T4J0 391 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 C1orf140Q5VVS0 124 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 CASP12Q6UXS9 341 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 SSX8Q7RTT4 187 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 EPHX4Q8IUS5 362 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 CADM2Q8N3J6 435 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 DPP10Q8N608 796 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 STK35Q8TDR2 534 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 GRIP2Q9C0E4 1043 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 RAD21L1Q9H4I0 556 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 C12orf10Q9HB07 376 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 B3GAT1Q9P2W7 334 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
PDLIM7-211ENST00000504318 A0A1W2PR80 420 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 CLOCKO15516 846 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 LY6G6DO95868 133 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 HEXAP06865 529 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 UQCRBP14927 111 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 CXCR1P25024 350 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 GZMMP51124 257 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 RPS4XP62701 263 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 CDK6Q00534 326 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 LGALS3BPQ08380 585 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 REEP3Q6NUK4 255 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 C1orf162Q8NEQ5 155 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 OR52N5Q8NH56 324 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 SMAP2Q8WU79 429 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 THOC1Q96FV9 657 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 TMEM120AQ9BXJ8 343 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 NELFAQ9H3P2 528 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 CXorf56Q9H5V9 222 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 NGBQ9NPG2 151 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 SLC17A5Q9NRA2 495 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 SEC14L4Q9UDX3 406 aa12.27□□□□□ -0.45
PDLIM7-211ENST00000504318 A0A1B0GWA3 101 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 E7EQL1 145 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 ABCD4O14678 606 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 ATP5HO75947 161 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF432O94892 652 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 MFN2O95140 757 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 PNMTP11086 282 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 PPIBP23284 216 aaKnown RBP12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 CD40P25942 277 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 CRYBA2P53672 197 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 LTBQ06643 244 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 CREB3L2Q70SY1 520 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 Q71RC1 249 aaPredicted RBP12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 NET1Q7Z628 596 aaPredicted RBP12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 UBE2J2Q8N2K1 259 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 ZNF232Q9UNY5 417 aa12.26□□□□□ -0.45
PDLIM7-211ENST00000504318 YLPM1P49750 1951 aaKnown RBP12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 A0A0B4J2E0 115 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 A0A1B0GX12 115 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 CCDC22O60826 627 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 NDUFS7O75251 213 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 IGHV4-39P01824 125 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 MPGP29372 298 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 CDKN1AP38936 164 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 SELENOPP49908 381 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 ATP5J2P56134 94 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 COPZ1P61923 177 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 SF3A3Q12874 501 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■■■ 49.4
PDLIM7-211ENST00000504318 SCARB2Q14108 478 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 NPTX1Q15818 432 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 C9orf135Q5VTT2 229 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 OR7E24Q6IFN5 339 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 CLEC9AQ6UXN8 241 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 WDFY1Q8IWB7 410 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 GPR32P1Q8NGA4 272 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 TAAR8Q969N4 342 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 MUCL1Q96DR8 90 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 ANKRD27Q96NW4 1050 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 BDH2Q9BUT1 245 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 SLCO5A1Q9H2Y9 848 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 PARPBPQ9NWS1 579 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 ADPRHL2Q9NX46 363 aa12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 CISD1Q9NZ45 108 aaKnown RBP12.25□□□□□ -0.45
PDLIM7-211ENST00000504318 A0A096LNT2 108 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 TMEM247A6NEH6 219 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 FBP2O00757 339 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 UPK3AO75631 287 aa12.24□□□□□ -0.45
PDLIM7-211ENST00000504318 VAMP5O95183 116 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms