RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 KIRREL2Q6UWL6 708 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 SEZ6L2Q6UXD5 910 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 GDPGP1Q6ZNW5 385 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 Q6ZS46 218 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 SHISA6Q6ZSJ9 500 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 Q6ZSR9 355 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 EIF3MQ7L2H7 374 aaKnown RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 NLRC3Q7RTR2 1065 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 ZNF551Q7Z340 670 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 HSD17B13Q7Z5P4 300 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 MCATQ8IVS2 390 aaKnown RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 Q8N402 240 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 EIF4E3Q8N5X7 224 aaKnown RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 ZNF565Q8N9K5 539 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 C19orf47Q8N9M1 422 aaKnown RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 B3GNT7Q8NFL0 401 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 IPMKQ8NFU5 416 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 DMBX1Q8NFW5 382 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 OR2L2Q8NH16 312 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 OR6S1Q8NH40 331 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 WFDC12Q8WWY7 111 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 HAS2Q92819 552 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 KISS1RQ969F8 398 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 SLC38A2Q96QD8 506 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 TREX2Q9BQ50 279 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 ZNF559Q9BR84 538 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 MENTQ9BUN1 341 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 MED28Q9H204 178 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 DLL4Q9NR61 685 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 PLSCR4Q9NRQ2 329 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 ABI3Q9P2A4 366 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 NDRG3Q9UGV2 375 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 C19orf53Q9UNZ5 99 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 HS3ST3B1Q9Y662 390 aa4.12□□□□□ -1.75
MATR3-202ENST00000502422 MAP1AP78559 2803 aaPredicted RBP4.12□□□□□ -1.75
MATR3-202ENST00000502422 MEIKINA0A087WXM9 373 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 GLYATL1P3A0A0U1RQE8 302 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FAM220BPB1ANY3 271 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HNRNPCL2B2RXH8 293 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FAM227AF5H4B4 570 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TEX46H3BTG2 121 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 PDCD5O14737 125 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CD3EAPO15446 510 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 PRAMEF2O60811 474 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 PSIP1O75475 530 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 RGS11O94810 467 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CDRT1O95170 752 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TFPIP10646 304 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 G6PDP11413 515 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ANXA3P12429 323 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CD1DP15813 335 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ABOP16442 354 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF3P17036 446 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MST1P26927 711 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SPAM1P38567 509 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 GDI2P50395 445 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 RAB28P51157 221 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 VSX2P58304 361 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 RIPPLY1Q0D2K3 151 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HNRNPA0Q13151 305 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 GPR176Q14439 515 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 MED22Q15528 200 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SNAPC1Q16533 368 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 KRTCAP3Q53RY4 240 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CDKL4Q5MAI5 379 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 BCL2L15Q5TBC7 163 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HECTD2Q5U5R9 776 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 VASNQ6EMK4 673 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FDX2Q6P4F2 183 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 BHLHB9Q6PI77 547 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 POMZP3Q6PJE2 187 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ANGPTL8Q6UXH0 198 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FAM151BQ6UXP7 276 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HSDL2Q6YN16 418 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 TMEM91Q6ZNR0 172 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SLC16A13Q7RTY0 426 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 OVCH1Q7RTY7 1134 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ASPGQ86U10 573 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ADGRF3Q8IZF5 1079 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 STX19Q8N4C7 294 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 OR2C3Q8N628 320 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SIRT6Q8N6T7 355 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 LRRC17Q8N6Y2 441 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 CLDN22Q8N7P3 220 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 UXS1Q8NBZ7 420 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 OR11G2Q8NGC1 345 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SFT2D1Q8WV19 159 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 HSD17B8Q92506 261 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 SENP5Q96HI0 755 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 KCNC2Q96PR1 638 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ATOH8Q96SQ7 321 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF251Q9BRH9 671 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 H2AFJQ9BTM1 129 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF436Q9C0F3 470 aaPredicted RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 NT5DC2Q9H857 520 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 WDR54Q9H977 334 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 ZNF160Q9HCG1 818 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 FAM60AQ9NP50 221 aa4.11□□□□□ -1.75
MATR3-202ENST00000502422 EXOSC4Q9NPD3 245 aaKnown RBP4.11□□□□□ -1.75
MATR3-202ENST00000502422 TMEM184CQ9NVA4 438 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms