RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 DUSP26Q9BV47 211 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 NOX3Q9HBY0 568 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 ESM1Q9NQ30 184 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 SLC52A3Q9NQ40 469 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 EXOSC3Q9NQT5 275 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 ZNF275Q9NSD4 429 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 PSMC3IPQ9P2W1 217 aaPredicted RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 OSGIN1Q9UJX0 560 aa10.05□□□□□ -0.8
CDK9-205ENST00000498339 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
CDK9-205ENST00000498339 AQP7P3A6NL99 342 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 UPK3AO75631 287 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 MPZL1O95297 269 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 AGR2O95994 175 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 HPXP02790 462 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 PROCP04070 461 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 IGFBP1P08833 259 aaPredicted RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 OR12D1P0DN82 309 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 UQCRBP14927 111 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 CBR1P16152 277 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 COL8A2P25067 703 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 ALDH3B1P43353 468 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 KCNJ10P78508 379 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 CCDC153Q494R4 210 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 GKAP1Q5VSY0 366 aaPredicted RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 PRAMEF8Q5VWM4 474 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 PRAMEF7Q5VXH5 474 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 KANK2Q63ZY3 851 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 ACSM5Q6NUN0 579 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 C1orf229Q6ZS94 237 aaPredicted RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 LINGO2Q7L985 606 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 KRTCAP2Q8N6L1 136 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 ZDHHC22Q8N966 263 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 FNDC5Q8NAU1 212 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 OR4A15Q8NGL6 344 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 AGR3Q8TD06 166 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 XAGE5Q8WWM1 108 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 CNOT9Q92600 299 aaKnown RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 RAB8BQ92930 207 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 ROPN1LQ96C74 230 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 ZNF416Q9BWM5 594 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
CDK9-205ENST00000498339 MS4A5Q9H3V2 200 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 DNAJC15Q9Y5T4 150 aa10.04□□□□□ -0.8
CDK9-205ENST00000498339 A0A1W2PPW3 197 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 LIPT2A6NK58 231 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 LYPLA1O75608 230 aaPredicted RBP10.03□□□□□ -0.8
CDK9-205ENST00000498339 SEC14L2O76054 403 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 AVPP01185 164 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 CHRM4P08173 479 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 HKR1P10072 659 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 ARAFP10398 606 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 CPA3P15088 417 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 CXCR1P25024 350 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 ARR3P36575 388 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 ARF1P84077 181 aaKnown RBP10.03□□□□□ -0.8
CDK9-205ENST00000498339 MAD2L1BPQ15013 274 aaPredicted RBP10.03□□□□□ -0.8
CDK9-205ENST00000498339 AVPI1Q5T686 147 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 DCAF12L2Q5VW00 463 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 FRRS1Q6ZNA5 592 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 CREB3L2Q70SY1 520 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 MDP1Q86V88 176 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 CLECL1Q8IZS7 167 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 RIBC1Q8N443 379 aaPredicted RBP10.03□□□□□ -0.8
CDK9-205ENST00000498339 FAM169BQ8N8A8 192 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 OIT3Q8WWZ8 545 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 YIPF5Q969M3 257 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 RAB39BQ96DA2 213 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 NELFAQ9H3P2 528 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 ZNF665Q9H7R5 613 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
CDK9-205ENST00000498339 NTN4Q9HB63 628 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 PYCARDQ9ULZ3 195 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 FZR1Q9UM11 496 aa10.03□□□□□ -0.8
CDK9-205ENST00000498339 PLIN3O60664 434 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 PRSS23O95084 383 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ABHD2P08910 425 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 CD79AP11912 226 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 PRPS1L1P21108 318 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 FPR2P25090 351 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ZFP36P26651 326 aaKnown RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 GTF2E2P29084 291 aaKnown RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 CHI3L1P36222 383 aaPredicted RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 MAP2K6P52564 334 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 SEC24CP53992 1094 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 TMEM33P57088 247 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 LMO4P61968 165 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ETF1P62495 437 aaKnown RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 GALK2Q01415 458 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 POU3F1Q03052 451 aaPredicted RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 MVKQ03426 396 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ZP4Q12836 540 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ALKBH6Q3KRA9 238 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms