RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 LRRC74BQ6ZQY2 392 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 SSX8Q7RTT4 187 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 MUC15Q8N387 334 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 PNPT1Q8TCS8 783 aaKnown RBP16.24■□□□□ 0.19
PRKCB-209ENST00000498058 RCN3Q96D15 328 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 RADILQ96JH8 1075 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 ADAM19Q9H013 955 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 RAD21L1Q9H4I0 556 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 ARL8BQ9NVJ2 186 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 RLIMQ9NVW2 624 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 MGAT4BQ9UQ53 548 aa16.24■□□□□ 0.19
PRKCB-209ENST00000498058 FBP2O00757 339 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 AIM2O14862 343 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 ZNF208O43345 1280 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 KRT75O95678 551 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 TP53P04637 393 aaPredicted RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 ANXA11P50995 505 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 POLR2HP52434 150 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 NUDT6P53370 316 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 MVDP53602 400 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 SLC35A1P78382 337 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 MXRA7P84157 204 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 NRF1Q16656 503 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 PAGE3Q5JUK9 113 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 LRIF1Q5T3J3 769 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 MRPL2Q5T653 305 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 ZNF525Q8N782 197 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 TMEM99Q8N816 258 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 WDR60Q8WVS4 1066 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 NANOS1Q8WY41 292 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 ZNF385AQ96PM9 386 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 SH3GL1Q99961 368 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 RHNO1Q9BSD3 238 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 PAIP1Q9H074 479 aaKnown RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.23■□□□□ 0.19
PRKCB-209ENST00000498058 POU2F3Q9UKI9 436 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 CORO2BQ9UQ03 480 aa16.23■□□□□ 0.19
PRKCB-209ENST00000498058 FAAHO00519 579 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 HNRNPCL1O60812 293 aaKnown RBP16.22■□□□□ 0.19
PRKCB-209ENST00000498058 ATP5HO75947 161 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 LY6HO94772 140 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 GKN3PP0CG01 181 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 FKBP2P26885 142 aaKnown RBP16.22■□□□□ 0.19
PRKCB-209ENST00000498058 SLC1A3P43003 542 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 HTR3AP46098 478 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 NUDT2P50583 147 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 FABP6P51161 128 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 TXNL4AP83876 142 aaKnown RBP16.22■□□□□ 0.19
PRKCB-209ENST00000498058 HPCAP84074 193 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 KLHL17Q6TDP4 642 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 HACD2Q6Y1H2 254 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 RETREG3Q86VR2 466 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 VRK2Q86Y07 508 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 CMIPQ8IY22 773 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 DDIT4LQ96D03 193 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
PRKCB-209ENST00000498058 CHST2Q9Y4C5 530 aa16.22■□□□□ 0.19
PRKCB-209ENST00000498058 STAB1Q9NY15 2570 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ELOA3DA6NLF2 546 aaPredicted RBP16.21■□□□□ 0.19
PRKCB-209ENST00000498058 EVPLLA8MZ36 301 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 UBOX5O94941 541 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 AKR7A3O95154 331 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ACAA2P42765 397 aaKnown RBP16.21■□□□□ 0.19
PRKCB-209ENST00000498058 P2RY4P51582 365 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 LGALS3BPQ08380 585 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 BNIP2Q12982 314 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 CEACAM7Q14002 265 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 TMEM249Q2WGJ8 235 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ELOA3BQ3SY89 546 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 OR7E24Q6IFN5 339 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 PAQR6Q6TCH4 344 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 C6orf89Q6UWU4 347 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ZNF836Q6ZNA1 936 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 CCDC121Q6ZUS5 278 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ARPINQ7Z6K5 226 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 FBXL14Q8N1E6 418 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ELOA3Q8NG57 546 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 LRRC58Q96CX6 371 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 CGREF1Q99674 301 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 HOPXQ9BPY8 73 aaPredicted RBP16.21■□□□□ 0.19
PRKCB-209ENST00000498058 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
PRKCB-209ENST00000498058 UPB1Q9UBR1 384 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 SLC9A8Q9Y2E8 581 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 AP3M1Q9Y2T2 418 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 PCDHB14Q9Y5E9 798 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 ATP23Q9Y6H3 246 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 MALRD1Q5VYJ5 2156 aa16.21■□□□□ 0.19
PRKCB-209ENST00000498058 CFAP73A6NFT4 308 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 LIPT2A6NK58 231 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 A8MV72 311 aaPredicted RBP16.2■□□□□ 0.18
PRKCB-209ENST00000498058 ATP6V1G2-DDX39BF2Z307 99 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 H7C417 338 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 EIF1BO60739 113 aaKnown RBP16.2■□□□□ 0.18
PRKCB-209ENST00000498058 NR2F1P10589 423 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 PRG2P13727 222 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 IL7RP16871 459 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 RASSF2P50749 326 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 MST1LQ2TV78 715 aa16.2■□□□□ 0.18
PRKCB-209ENST00000498058 GTDC1Q4AE62 458 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms