RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 EBF4Q9BQW3 602 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 TTYH2Q9BSA4 534 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 TMEM175Q9BSA9 504 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 SLC26A1Q9H2B4 701 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 SLC25A19Q9HC21 320 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 MRPL47Q9HD33 250 aaKnown RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 DDX28Q9NUL7 540 aaKnown RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 TAS2R16Q9NYV7 291 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 STOX2Q9P2F5 926 aaPredicted RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 RCOR3Q9P2K3 495 aaPredicted RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 MARCOQ9UEW3 520 aaPredicted RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 MLXQ9UH92 298 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 RSPH14Q9UHP6 348 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 KIAA1257Q9ULG3 409 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 FOXA2Q9Y261 457 aaPredicted RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 ATG4BQ9Y4P1 393 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 MAD1L1Q9Y6D9 718 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 KIF25-AS1Q9Y6Z4 181 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 PIKFYVEQ9Y2I7 2098 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 MUC22E2RYF6 1773 aaPredicted RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
RIF1-212ENST00000498041 PCM1Q15154 2024 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 FANCMQ8IYD8 2048 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 TRPM6Q9BX84 2022 aa2.12□□□□□ -2.07
RIF1-212ENST00000498041 NUP210Q8TEM1 1887 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 THADAQ6YHU6 1953 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GOLGA8QA0A0J9YX86 632 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TMEM120BA0PK00 339 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GOLGA8OA6NCC3 632 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ARHGAP42A6NI28 874 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 MIF4GDA9UHW6 222 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 E7ESA3 106 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GOLGA8NF8WBI6 632 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 APOC4-APOC2K7ER74 178 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CDC7O00311 574 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 UBFD1O14562 309 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 RASGRF2O14827 1237 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 HAT1O14929 419 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 RAD51BO15315 384 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 KDELR3O43731 214 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TYROBPO43914 113 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CACNG3O60359 315 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 NIPSNAP2O75323 286 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GMNNO75496 209 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 VAPBO95292 243 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GOT2P00505 430 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 APOC2P02655 101 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 SFTPBP07988 381 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 KRT7P08729 469 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 SNRPCP09234 159 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 DUX4L4P0CJ87 422 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CCNB1P14635 433 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 IL9P15248 144 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 PSMC3P17980 439 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ANXA13P27216 316 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 OR1E1P30953 314 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 HMGCLP35914 325 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ATP5C1P36542 298 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 MDH1P40925 334 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 OPRD1P41143 372 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 MAGEA3P43357 314 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 MAGEA9P43362 315 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ACADSBP45954 432 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FNTAP49354 379 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GEMP55040 296 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FOXA1P55317 472 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 PRMT2P55345 433 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 NME5P56597 212 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TAS2R39P59534 338 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 XIAPP98170 497 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GNA12Q03113 381 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 DNAJC3Q13217 504 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GK2Q14410 553 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 PDK2Q15119 407 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 OR4D1Q15615 310 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CHRNA6Q15825 494 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 KYAT1Q16773 422 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 HADHQ16836 314 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 SMU1Q2TAY7 513 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 AARDQ4LEZ3 155 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 IFI44LQ53G44 452 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CTSL3PQ5NE16 218 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 PPM1LQ5SGD2 360 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 RTL6Q6ICC9 239 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ISLR2Q6UXK2 745 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 OLIG3Q7RTU3 272 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 STHQ8IWL8 128 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CTAGE3PQ8IX95 158 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 LINC00518Q8N0U6 118 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 STK40Q8N2I9 435 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 LRRC43Q8N309 656 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 KIF2BQ8N4N8 673 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 MREGQ8N565 214 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CLDN19Q8N6F1 224 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 GPR26Q8NDV2 337 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 LPCAT1Q8NF37 534 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 OR4K2Q8NGD2 314 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 BLOC1S5Q8TDH9 187 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 DDI1Q8WTU0 396 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms