RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 RNPS1Q15287 305 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 OR7A5Q15622 319 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 ZBED5Q49AG3 693 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 SOWAHCQ53LP3 525 aaPredicted RBP17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 EMC4Q5J8M3 183 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 PPP4R4Q6NUP7 873 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 STK32CQ86UX6 486 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 AQP11Q8NBQ7 271 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 ATP6V1C2Q8NEY4 427 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 SMPDL3BQ92485 455 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 MOGAT1Q96PD6 335 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 GPX7Q96SL4 187 aaPredicted RBP17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 TUBA1CQ9BQE3 449 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 SEMA6AQ9H2E6 1030 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 CHST11Q9NPF2 352 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 CAMK2AQ9UQM7 478 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 SIGLEC7Q9Y286 467 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 POFUT2Q9Y2G5 429 aa17.67■□□□□ 0.42
SCAMP3-209ENST00000497470 SHANK1Q9Y566 2161 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 H0YJX3 145 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 PLPP3O14495 311 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 ATP6V1G2O95670 118 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 STSP08842 583 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 APEHP13798 732 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 MAKP20794 623 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 TIMP3P35625 211 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 P2RY4P51582 365 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 HSF1Q00613 529 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 ACSF3Q4G176 576 aaPredicted RBP17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 OGFRL1Q5TC84 451 aaPredicted RBP17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 ABLIM2Q6H8Q1 611 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 OR2A2Q6IF42 318 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 ZBTB49Q6ZSB9 765 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 PXKQ7Z7A4 578 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 OAFQ86UD1 273 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 EPHX4Q8IUS5 362 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 UBQLNLQ8IYU4 475 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 OR9Q2Q8NGE9 314 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 RNF128Q8TEB7 428 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 EME1Q96AY2 570 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 TM9SF2Q99805 663 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 UCK2Q9BZX2 261 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 POLEQ07864 2286 aa17.66■□□□□ 0.42
SCAMP3-209ENST00000497470 IGSF10Q6WRI0 2623 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 MED12Q93074 2177 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 MBD3L4A6NDZ8 208 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 MBD3L3A6NE82 208 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 UNC119BA6NIH7 251 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 MBD3L5A6NJ08 208 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 CLCA1A8K7I4 914 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 KPNA4O00629 521 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 CDC42EP2O14613 210 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 GPR171O14626 319 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 PIP5K1CO60331 668 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ALPLP05186 524 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 SAGP10523 405 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ACVR2AP27037 513 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ALDH3A2P51648 485 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 CASP6P55212 293 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ESRRGP62508 458 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 LSM11P83369 360 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 FHL1Q13642 323 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 NANOGNBQ7Z5D8 188 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ZNF843Q8N446 348 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ATG16L2Q8NAA4 619 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ICA1LQ8NDH6 482 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 MBD3L2Q8NHZ7 208 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 FAM46AQ96IP4 442 aaKnown RBP17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 OXGR1Q96P68 337 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 SRXN1Q9BYN0 137 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 VCX3BQ9H321 246 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 BCO1Q9HAY6 547 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 PNPLA3Q9NST1 481 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 KLHL9Q9P2J3 617 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 NOX1Q9Y5S8 564 aa17.65■□□□□ 0.42
SCAMP3-209ENST00000497470 ZNF724A8MTY0 619 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 E9PLN8 166 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 H0YC42 278 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 M0R082 166 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 SMAD9O15198 467 aaKnown RBP17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 IDH3BO43837 385 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 NDUFB2O95178 105 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 TPOP07202 933 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 CDH2P19022 906 aaPredicted RBP17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 DAPP51397 102 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 RAD23AP54725 363 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 TPD52P55327 224 aaPredicted RBP17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 SRYQ05066 204 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 PUDPQ08623 228 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 C19orf57Q0VDD7 668 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 PPP1R8Q12972 351 aaKnown RBP17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 PMS2P3Q13401 168 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 DAG1Q14118 895 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 OTUD3Q5T2D3 398 aaPredicted RBP17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 C1orf185Q5T7R7 199 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 TMEM211Q6ICI0 200 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 ZNF620Q6ZNG0 422 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 FCRLAQ7L513 359 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 DOLPP1Q86YN1 238 aa17.64■□□□□ 0.41
SCAMP3-209ENST00000497470 P3H2Q8IVL5 708 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms