RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CACYBPQ9HB71 228 aaKnown RBP12.51□□□□□ -0.41
VTI1A-209ENST00000496445 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 MGAT4BQ9UQ53 548 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 SONP18583 2426 aaKnown RBP12.5□□□□□ -0.41
VTI1A-209ENST00000496445 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 C5orf58C9J3I9 102 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 PNMTP11086 282 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 ETS2P15036 469 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 PCSK6P29122 969 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 SELENOPP49908 381 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 ATP4BP51164 291 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 SQLEQ14534 574 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 SLC22A25Q6T423 547 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 C6orf89Q6UWU4 347 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 CREB3L2Q70SY1 520 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-209ENST00000496445 RADILQ96JH8 1075 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-209ENST00000496445 DHRS9Q9BPW9 319 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 ALG2Q9H553 416 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 B3GALT5Q9Y2C3 310 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 AMDHD2Q9Y303 409 aa12.5□□□□□ -0.41
VTI1A-209ENST00000496445 A0A1B0GWA3 101 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 TPST1O60507 370 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 VAMP5O95183 116 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 AHSA1O95433 338 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 TTKP33981 857 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
VTI1A-209ENST00000496445 IRX1P78414 480 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-209ENST00000496445 CDK6Q00534 326 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 ADRM1Q16186 407 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 AGKQ53H12 422 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 REEP3Q6NUK4 255 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 DHRS4L2Q6PKH6 230 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 DLEU7Q6UYE1 221 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 POMGNT2Q8NAT1 580 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 MFSD8Q8NHS3 518 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 DYDC1Q8WWB3 177 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 WFDC6Q9BQY6 131 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 CPPED1Q9BRF8 314 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-209ENST00000496445 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 CACNG6Q9BXT2 260 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF385DQ9H6B1 395 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 TMEM38AQ9H6F2 299 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 TMEM45AQ9NWC5 275 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 B3GAT1Q9P2W7 334 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 POU2F3Q9UKI9 436 aa12.49□□□□□ -0.41
VTI1A-209ENST00000496445 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
VTI1A-209ENST00000496445 UPK3AO75631 287 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 LGI1O95970 557 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 GPX2P18283 190 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 CDH2P19022 906 aaPredicted RBP12.48□□□□□ -0.41
VTI1A-209ENST00000496445 PPIBP23284 216 aaKnown RBP12.48□□□□□ -0.41
VTI1A-209ENST00000496445 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 SCARB2Q14108 478 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 TMEM225Q6GV28 225 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 NIPAL3Q6P499 406 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 PRIMA1Q86XR5 153 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 KDM8Q8N371 416 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 LSMEM1Q8N8F7 131 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 OR1K1Q8NGR3 316 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 STON2Q8WXE9 905 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 TAAR8Q969N4 342 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 SLC25A36Q96CQ1 311 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 THOC1Q96FV9 657 aaKnown RBP12.48□□□□□ -0.41
VTI1A-209ENST00000496445 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 INTS9Q9NV88 658 aaKnown RBP12.48□□□□□ -0.41
VTI1A-209ENST00000496445 RASD1Q9Y272 281 aa12.48□□□□□ -0.41
VTI1A-209ENST00000496445 ARFGEF3Q5TH69 2177 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 CHD3Q12873 2000 aaKnown RBP12.47□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF587BE7ETH6 402 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 ATP6V1G2-DDX39BF2Z307 99 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 TPST2O60704 377 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF432O94892 652 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 AQP1P29972 269 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 FABP6P51161 128 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 SELPLGQ14242 412 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 RETREG3Q86VR2 466 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 PTOV1Q86YD1 416 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 MUC15Q8N387 334 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 REG4Q9BYZ8 158 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 RPS6KB2Q9UBS0 482 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms