RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PYHIN1Q6K0P9 492 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 IL20RBQ6UXL0 311 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 TRILQ7L0X0 811 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 GHDCQ8N2G8 530 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 OR4M1Q8NGD0 313 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 OR13C5Q8NGS8 318 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 MOSPD2Q8NHP6 518 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF721Q8TF20 911 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SLC7A6Q92536 515 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ADIPOR1Q96A54 375 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SNX18Q96RF0 628 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ADOQ96SZ5 270 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ALG12Q9BV10 488 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 LAT2Q9GZY6 243 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 RXFP3Q9NSD7 469 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 DHCR7Q9UBM7 475 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 COPS7AQ9UBW8 275 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 TCRBV16S1A1N1A0A5B0 115 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF879B4DU55 563 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ORC5O43913 435 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 FZD7O75084 574 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 CPNE3O75131 537 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 TRIM3O75382 744 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 DDAH2O95865 285 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HIST1H2ABP04908 130 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 UCHL1P09936 223 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ASAH2BP0C7U1 165 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 FBLP22087 321 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 CSNK1EP49674 416 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SLC25A1P53007 311 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 CLDN20P56880 219 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 CTXN1P60606 82 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 TATDN3Q17R31 274 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 EMC4Q5J8M3 183 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HIST3H2AQ7L7L0 130 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 OVCH1Q7RTY7 1134 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 NANOGNBQ7Z5D8 188 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ZPLD1Q8TCW7 415 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HIST1H2ACQ93077 130 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 Q96M85 177 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 THAP7Q9BT49 309 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 WACQ9BTA9 647 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 ACOXLQ9NUZ1 547 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 NLKQ9UBE8 527 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 GRHPRQ9UBQ7 328 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 COPS3Q9UNS2 423 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 MPDZO75970 2070 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 MAGEB4O15481 346 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 OIP5O43482 229 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 TACSTD2P09758 323 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 TACR3P29371 465 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 CDKN2AP42771 156 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 GPLD1P80108 840 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 MRPS15P82914 257 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 PITPNAQ00169 270 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 EGR4Q05215 589 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 NSDHLQ15738 373 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 BCL2A1Q16548 175 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SLC25A35Q3KQZ1 300 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 HSD17B12Q53GQ0 312 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SNAP47Q5SQN1 464 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SLC6A19Q695T7 634 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 APOOLQ6UXV4 268 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 FAM122BQ7Z309 247 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 FAM220AQ7Z4H9 259 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 D2HGDHQ8N465 521 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 OR1L3Q8NH93 324 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 HAVCR2Q8TDQ0 301 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ZNRF4Q8WWF5 429 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SHDQ96IW2 340 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 MOGAT1Q96PD6 335 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 TTYH1Q9H313 450 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 NUFIP1Q9UHK0 495 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 RBMX2Q9Y388 322 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SPAG17Q6Q759 2223 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 CEP192Q8TEP8 1941 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 A0A1W2PQD3 144 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 HCRTR2O43614 444 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ICOSLGO75144 302 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SLC43A1O75387 559 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 TXNDC12O95881 172 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 PAHP00439 452 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 FAM157BP0CG42 384 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 EPXP11678 715 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 GLB1P16278 677 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 HOXD12P35452 270 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ZP2Q05996 745 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 EBPQ15125 230 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SMAD2Q15796 467 aaKnown RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 LINC01590Q5TEZ4 76 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ARHGAP40Q5TG30 622 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 YOD1Q5VVQ6 348 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 BICRALQ6AI39 1079 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms