RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 MPP4Q96JB8 637 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OR5B2Q96R09 309 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ZNF300Q96RE9 604 aaPredicted RBP9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 FNDC11Q9BVV2 318 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 KRTAP9-3Q9BYQ3 159 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TP63Q9H3D4 680 aaPredicted RBP9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 IL1RAPQ9NPH3 570 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PNPLA3Q9NST1 481 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PAQR5Q9NXK6 330 aaPredicted RBP9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ALKBH4Q9NXW9 302 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 RIMS3Q9UJD0 308 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SLC7A7Q9UM01 511 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 A4GNTQ9UNA3 340 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 AURKCQ9UQB9 309 aa9.07□□□□□ -0.96
RAB11FIP3-211ENST00000495663 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PHF3Q92576 2039 aaKnown RBP9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 A0A087WUJ7 227 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 A0A0J9YW62 118 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 J3KTA2 159 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TNFSF11O14788 317 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 THY1P04216 161 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 HOXD4P09016 255 aaPredicted RBP9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SHC1P29353 583 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PTGER4P35408 488 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ERFP50548 548 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SUCLG1P53597 346 aaKnown RBP9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SGCBQ16585 318 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 HBMQ6B0K9 141 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TTC33Q6PID6 262 aaPredicted RBP9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PIWIL3Q7Z3Z3 882 aaKnown RBP9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ADGRG5Q8IZF4 528 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OFCC1Q8IZS5 231 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OR2V1Q8NHB1 315 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ZPLD1Q8TCW7 415 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CANT1Q8WVQ1 401 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ADGRG7Q96K78 797 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ZNF347Q96SE7 839 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TMEM43Q9BTV4 400 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 POTEKPQ9BYX7 375 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 YY1AP1Q9H869 796 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TIGARQ9NQ88 270 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 NDUFAF4Q9P032 175 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OSGIN2Q9Y236 505 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 HDGFL3Q9Y3E1 203 aa9.06□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TRGV8A0A0C4DH27 118 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ZC3H12DA2A288 527 aaKnown RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 H0YC42 278 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 FFAR1O14842 300 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ADAMDEC1O15204 470 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 DIRAS1O95057 198 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PRSS23O95084 383 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 LYPD3O95274 346 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 AHSA1O95433 338 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PMS2P2O95744 297 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 H1F0P07305 194 aaKnown RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 STSP08842 583 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 GNLYP22749 145 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ACVR2AP27037 513 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 IDUAP35475 653 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 RBM34P42696 430 aaKnown RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CA7P43166 264 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 MAGEA2P43356 314 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 UQCRFS1P47985 274 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TPD52P55327 224 aaPredicted RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CLDN15P56746 228 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CARD18P57730 90 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SMIM11AP58511 58 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CSNK2A1P68400 391 aaPredicted RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 MYBPHQ13203 477 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TRAM2Q15035 370 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CTU2Q2VPK5 515 aaKnown RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 IQCCQ4KMZ1 466 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 C1orf140Q5VVS0 124 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TMPPEQ6ZT21 453 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TSEN54Q7Z6J9 526 aaKnown RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 DOLPP1Q86YN1 238 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 OR10D3Q8NH80 312 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CPNE4Q96A23 557 aaPredicted RBP9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ARL5BQ96KC2 179 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 HS6ST2Q96MM7 605 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 EPYCQ99645 322 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PIP5K1AQ99755 562 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TUBA1CQ9BQE3 449 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 PRSS27Q9BQR3 290 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ZNF426Q9BUY5 554 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SLC19A3Q9BZV2 496 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 ANKRD19PQ9H560 264 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 RHCGQ9UBD6 479 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TINAGQ9UJW2 476 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TRAPPC4Q9Y296 219 aa9.05□□□□□ -0.96
RAB11FIP3-211ENST00000495663 IGKV1D-42A0A075B6H8 117 aa9.04□□□□□ -0.96
RAB11FIP3-211ENST00000495663 TRAV36DV7A0A075B6V5 113 aa9.04□□□□□ -0.96
RAB11FIP3-211ENST00000495663 CLCA1A8K7I4 914 aa9.04□□□□□ -0.96
RAB11FIP3-211ENST00000495663 SULT2B1O00204 365 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms