RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	IL1RL1	Q01638	556 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	LY6D	Q14210	128 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	CTU2	Q2VPK5	515 aa	Known RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	GTF2IRD2B	Q6EKJ0	949 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	KLHL17	Q6TDP4	642 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	GTF2IRD2	Q86UP8	949 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	P3H2	Q8IVL5	708 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF555	Q8NEP9	628 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	OR10D3	Q8NH80	312 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	ZPLD1	Q8TCW7	415 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SLC39A7	Q92504	469 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SNRNP40	Q96DI7	357 aa	Known RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	ADGRG7	Q96K78	797 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	NIPSNAP1	Q9BPW8	284 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SF3B5	Q9BWJ5	86 aa	Known RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SMURF2	Q9HAU4	748 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	FANCF	Q9NPI8	374 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	IL20	Q9NYY1	176 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SPRR3	Q9UBC9	169 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	CAMK2A	Q9UQM7	478 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	DNAJC13	O75165	2243 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973		A0A1B0GTH9	108 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	LOC102725191	A0A1B0GVB3	256 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	NPIPB13	A6NJU9	1138 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	NPIPB4	C9JG80	1138 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973		M0R082	166 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	APEH	P13798	732 aa	Known RBP	12.15	□□□□□ -0.46
APTX-231	ENST00000494973	PTN	P21246	168 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	FUT4	P22083	530 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	STAR	P49675	285 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	TDGF1P3	P51864	188 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	CLDN15	P56746	228 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	CLDN20	P56880	219 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	PUDP	Q08623	228 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	ZP4	Q12836	540 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	TTC23	Q5W5X9	447 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	FAM205BP	Q63HN1	556 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	GALNT4	Q8N4A0	578 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	ANKK1	Q8NFD2	765 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	OR13C2	Q8NGS9	318 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF417	Q8TAU3	575 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	NRG4	Q8WWG1	115 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	WDYHV1	Q96HA8	205 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	MOGAT1	Q96PD6	335 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	GPX7	Q96SL4	187 aa	Predicted RBP	12.15	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.15	□□□□□ -0.46
APTX-231	ENST00000494973	OR52D1	Q9H346	318 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973		Q9H521	79 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	GP6	Q9HCN6	339 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	TBC1D23	Q9NUY8	699 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.15	□□□□□ -0.46
APTX-231	ENST00000494973	SIGLEC7	Q9Y286	467 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	NOX1	Q9Y5S8	564 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF407	Q9C0G0	2248 aa		12.15	□□□□□ -0.46
APTX-231	ENST00000494973	PIEZO2	Q9H5I5	2752 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973		H0YAE9	185 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973		M0R3G1	203 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	CDC42EP2	O14613	210 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	PRRG2	O14669	202 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	IDH3B	O43837	385 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	CXCL13	O43927	109 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	WISP1	O95388	367 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	TSPAN19	P0C672	248 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	ADORA3	P0DMS8	318 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	ABO	P16442	354 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SHC1	P29353	583 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	UQCRC1	P31930	480 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	RPL4	P36578	427 aa	Known RBP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	DAP3	P51398	398 aa	Known RBP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SMS	P52788	366 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	CRISP1	P54107	249 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	CASP6	P55212	293 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	LSM11	P83369	360 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SRY	Q05066	204 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	NPRL3	Q12980	569 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	PDK3	Q15120	406 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	RNPS1	Q15287	305 aa	Known RBP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	POU4F3	Q15319	338 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	ALG10	Q5BKT4	473 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	C1QL3	Q5VWW1	255 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	GPR139	Q6DWJ6	353 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	TMEM225	Q6GV28	225 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SLC27A4	Q6P1M0	643 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	GFRAL	Q6UXV0	394 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	IZUMO2	Q6UXV1	221 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	DPY19L2P2	Q6ZN68	376 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	PXK	Q7Z7A4	578 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	OR2T33	Q8NG76	320 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	OR51A7	Q8NH64	312 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF184	Q99676	751 aa	Predicted RBP	12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SLC29A1	Q99808	456 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	PRRG4	Q9BZD6	226 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	RIBC2	Q9H4K1	309 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	SLC25A19	Q9HC21	320 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	INIP	Q9NRY2	104 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	GLRX2	Q9NS18	164 aa		12.14	□□□□□ -0.47
APTX-231	ENST00000494973	EMC3	Q9P0I2	261 aa		12.14	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms