RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 HOXC12P31275 282 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 IL1RL1Q01638 556 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 EGR4Q05215 589 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 CCDC80Q76M96 950 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 OR6S1Q8NH40 331 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 CCL19Q99731 98 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 PTDSS2Q9BVG9 487 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 PRR14Q9BWN1 585 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 RSPO3Q9BXY4 272 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-211ENST00000494800 SLCO5A1Q9H2Y9 848 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 BAG5Q9UL15 447 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 B3GALT5Q9Y2C3 310 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 CORINQ9Y5Q5 1042 aa15.57■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF43P17038 809 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CD53P19397 219 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CD247P20963 164 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 GZMMP51124 257 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CDH12P55289 794 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 C1DQ13901 141 aaKnown RBP15.56■□□□□ 0.08
HDAC4-211ENST00000494800 NRF1Q16656 503 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CREB3L2Q70SY1 520 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CPLX4Q7Z7G2 160 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CALHM3Q86XJ0 350 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 C10orf53Q8N6V4 93 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 VANGL1Q8TAA9 524 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-211ENST00000494800 TAAR8Q969N4 342 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 TAMM41Q96BW9 452 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 RCN3Q96D15 328 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF385AQ96PM9 386 aaKnown RBP15.56■□□□□ 0.08
HDAC4-211ENST00000494800 ELAC2Q9BQ52 826 aaKnown RBP15.56■□□□□ 0.08
HDAC4-211ENST00000494800 TMEM43Q9BTV4 400 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 ASPNQ9BXN1 380 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 RNF115Q9Y4L5 304 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 CCDC168Q8NDH2 2452 aa15.56■□□□□ 0.08
HDAC4-211ENST00000494800 FAM220BPB1ANY3 271 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 CLOCKO15516 846 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 CHP2O43745 196 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 AKAP8O43823 692 aaKnown RBP15.55■□□□□ 0.08
HDAC4-211ENST00000494800 COX4I1P13073 169 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 NQO1P15559 274 aaKnown RBP15.55■□□□□ 0.08
HDAC4-211ENST00000494800 LOXP28300 417 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-211ENST00000494800 NTF4P34130 210 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 P2RY4P51582 365 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 ENTPD8Q5MY95 495 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 C1QTNF12Q5T7M4 302 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 TSPO2Q5TGU0 170 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 KLHL17Q6TDP4 642 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 H1FNTQ75WM6 255 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-211ENST00000494800 C17orf78Q8N4C9 275 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 POU5F2Q8N7G0 328 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 ZIC4Q8N9L1 334 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 C1orf162Q8NEQ5 155 aaPredicted RBP15.55■□□□□ 0.08
HDAC4-211ENST00000494800 OR2T12Q8NG77 320 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 GPR32P1Q8NGA4 272 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 OR6T1Q8NGN1 323 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 CMTM5Q96DZ9 223 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 OXGR1Q96P68 337 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 PIP5K1AQ99755 562 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 FAM107BQ9H098 131 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 EFCAB1Q9HAE3 211 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 SLC7A10Q9NS82 523 aa15.55■□□□□ 0.08
HDAC4-211ENST00000494800 HRNRQ86YZ3 2850 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-211ENST00000494800 SPG11Q96JI7 2443 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 IGKV1D-42A0A075B6H8 117 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 TRAPPC13A5PLN9 417 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 CPSF4LA6NMK7 179 aaKnown RBP15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF587BE7ETH6 402 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 M0R082 166 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 NDUFAB1O14561 156 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 TPST2O60704 377 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 SMPD2O60906 423 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 MPGP29372 298 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 GRPRP30550 384 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 NCMAPQ5T1S8 102 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 NIPAL3Q6P499 406 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 TTC33Q6PID6 262 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-211ENST00000494800 KLHL24Q6TFL4 600 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 SCAIQ8N9R8 606 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ADPRHL1Q8NDY3 354 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF417Q8TAU3 575 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ADAMTS16Q8TE57 1224 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 MPP4Q96JB8 637 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF583Q96ND8 569 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 MUS81Q96NY9 551 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ZNF587Q96SQ5 575 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-211ENST00000494800 HOPXQ9BPY8 73 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-211ENST00000494800 TMEM204Q9BSN7 226 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 RCE1Q9Y256 329 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 SH3GLB1Q9Y371 365 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 AKAP9Q99996 3911 aa15.54■□□□□ 0.08
HDAC4-211ENST00000494800 ELOVL7A1L3X0 281 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 HS3ST1O14792 307 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 ARHGEF9O43307 516 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 FZD7O75084 574 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 MT-ATP6P00846 226 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 ITGA5P08648 1049 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 SEC24CP53992 1094 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 BSPH1Q075Z2 132 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 GABRA6Q16445 453 aa15.53■□□□□ 0.08
HDAC4-211ENST00000494800 LRRC23Q53EV4 343 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms