RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 UPK3AO75631 287 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 HNRNPCL4P0DMR1 293 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 PNMTP11086 282 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 UQCRBP14927 111 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 NCF2P19878 526 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 MPGP29372 298 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 MRPL19P49406 292 aaKnown RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 IDH3AP50213 366 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 MAP2K6P52564 334 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 PPP2R2BQ00005 443 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 TTMPQ5BVD1 217 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 ZNF311Q5JNZ3 666 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 LRIF1Q5T3J3 769 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 AGAP6Q5VW22 663 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 PRAMEF8Q5VWM4 474 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 PRAMEF7Q5VXH5 474 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 OR7E24Q6IFN5 339 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 CREB3L2Q70SY1 520 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 AAED1Q7RTV5 226 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 WDFY1Q8IWB7 410 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 C17orf78Q8N4C9 275 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 C1orf162Q8NEQ5 155 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 NFKBIDQ8NI38 313 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 KTI12Q96EK9 354 aaPredicted RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 HS6ST2Q96MM7 605 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 C7orf26Q96N11 449 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 SF3B5Q9BWJ5 86 aaKnown RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 RMND5AQ9H871 391 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 BCL2L10Q9HD36 194 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 TCF7L2Q9NQB0 619 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 CBLN4Q9NTU7 201 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 FAIMQ9NVQ4 179 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 VAPAQ9P0L0 249 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 POU2F3Q9UKI9 436 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 AMDHD2Q9Y303 409 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 A0A096LPI6 279 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 IGHV1-18A0A0C4DH31 117 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 ZNF503-AS2A6NEH8 195 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 NR5A2O00482 541 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 ARAFP10398 606 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 RPS5P46782 204 aaKnown RBP10.16□□□□□ -0.78
VTI1A-208ENST00000494728 COPZ1P61923 177 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 FADDQ13158 208 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 LARS2Q15031 903 aaKnown RBP10.16□□□□□ -0.78
VTI1A-208ENST00000494728 TBRG1Q3YBR2 411 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 C6orf89Q6UWU4 347 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 SSX8Q7RTT4 187 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 OR1K1Q8NGR3 316 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
VTI1A-208ENST00000494728 ZNF837Q96EG3 531 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-208ENST00000494728 RADILQ96JH8 1075 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 PARPBPQ9NWS1 579 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 CCDC167Q9P0B6 97 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 MOKQ9UQ07 419 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 MGAT4BQ9UQ53 548 aa10.16□□□□□ -0.78
VTI1A-208ENST00000494728 A0A1B0GWA3 101 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 H7C417 338 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-208ENST00000494728 CD5LO43866 347 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 TPST2O60704 377 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 AHSA1O95433 338 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 HPRP00739 348 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 CELA3BP08861 270 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 FABP6P51161 128 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 NUDT6P53370 316 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 ADRM1Q16186 407 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 NRF1Q16656 503 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 MST1LQ2TV78 715 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 AGBL2Q5U5Z8 902 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 TMEM225Q6GV28 225 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 NIPAL3Q6P499 406 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 FBXL14Q8N1E6 418 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 POMGNT2Q8NAT1 580 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 OR10H5Q8NGA6 315 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 BBS10Q8TAM1 723 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 TAAR8Q969N4 342 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 SLC25A36Q96CQ1 311 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 SPDL1Q96EA4 605 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 TAPBPLQ9BX59 468 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 BARX1Q9HBU1 254 aaPredicted RBP10.15□□□□□ -0.78
VTI1A-208ENST00000494728 ATP23Q9Y6H3 246 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.78
VTI1A-208ENST00000494728 A0A096LPE4 126 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 A0A1W2PPZ6 126 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 M0R082 166 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 TRAF3IP2O43734 574 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-208ENST00000494728 ERLIN1O75477 346 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 SEC14L2O76054 403 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 ZNF432O94892 652 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 ETS2P15036 469 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 CBLP22681 906 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 AQP1P29972 269 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 CALCRP30988 508 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 PRKAR1BP31321 381 aa10.14□□□□□ -0.79
VTI1A-208ENST00000494728 AQP5P55064 265 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms