RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CLIC1O00299 241 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 POLR3GO15318 223 aaPredicted RBP11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 MRPL19P49406 292 aaKnown RBP11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 UBE2NP61088 152 aaKnown RBP11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 FADDQ13158 208 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 RGNQ15493 299 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 C1orf140Q5VVS0 124 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 PRAMEF8Q5VWM4 474 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 PRAMEF7Q5VXH5 474 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 LINGO2Q7L985 606 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 C7orf26Q96N11 449 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 SPATA5L1Q9BVQ7 753 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 AMBRA1Q9C0C7 1298 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 SEC14L4Q9UDX3 406 aa11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 GDF2Q9UK05 429 aaPredicted RBP11.74□□□□□ -0.53
CTDSP1-212ENST00000494067 TRBV5-3A0A0A0MS03 114 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 ZNF587BE7ETH6 402 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 TLX2O43763 284 aaPredicted RBP11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 NPIPB7O75200 414 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 CRLF1O75462 422 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 TGDSO95455 350 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 BMP2P12643 396 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 PPIBP23284 216 aaKnown RBP11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 EGR4Q05215 589 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 GLIPR1L2Q4G1C9 344 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 C5orf46Q6UWT4 87 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 LRRC8CQ8TDW0 803 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 SLC35B4Q969S0 331 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 PTDSS2Q9BVG9 487 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 PRR14Q9BWN1 585 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 MOV10Q9HCE1 1003 aaKnown RBP11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 BCL2L10Q9HD36 194 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 A4GALTQ9NPC4 353 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 SELENONQ9NZV5 590 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 VAPAQ9P0L0 249 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 SLC13A4Q9UKG4 626 aa11.73□□□□□ -0.53
CTDSP1-212ENST00000494067 FTCDNL1E5RQL4 147 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 OR2T1O43869 369 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 TPST1O60507 370 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 ZNF43P17038 809 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 HTR2AP28223 471 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 NCALDP61601 193 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 C1DQ13901 141 aaKnown RBP11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 HMBOX1Q6NT76 420 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 NIPAL3Q6P499 406 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 BLOC1S3Q6QNY0 202 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 CREB3L2Q70SY1 520 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 MFSD8Q8NHS3 518 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 DYDC1Q8WWB3 177 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 TCF7L2Q9NQB0 619 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 CORO2BQ9UQ03 480 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 DNHD1Q96M86 4753 aa11.72□□□□□ -0.53
CTDSP1-212ENST00000494067 VSTM5A8MXK1 200 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 EVPLLA8MZ36 301 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 H7C417 338 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 NR5A2O00482 541 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 CD5LO43866 347 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 IFNA2P01563 188 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 CRYAAP02489 173 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 CSF3P09919 207 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 PNMTP11086 282 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 ETS2P15036 469 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 PRKAR1BP31321 381 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 RPS5P46782 204 aaKnown RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 AQP5P55064 265 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 IRX1P78414 480 aaPredicted RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 GCNT6Q5T4J0 391 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 WDFY1Q8IWB7 410 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 KDM8Q8N371 416 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 NFKBIDQ8NI38 313 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 FAM168AQ92567 244 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 HTRA1Q92743 480 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 KTI12Q96EK9 354 aaPredicted RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 THOC1Q96FV9 657 aaKnown RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 ATP6V1G3Q96LB4 118 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 ZNF317Q96PQ6 595 aaPredicted RBP11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 ZNF607Q96SK3 696 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 C12orf10Q9HB07 376 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 CCDC167Q9P0B6 97 aa11.71□□□□□ -0.53
CTDSP1-212ENST00000494067 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms