RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, human

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-208	ENST00000493507	SEBOX	Q9HB31	216 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	AGPAT4	Q9NRZ5	378 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SPRR3	Q9UBC9	169 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF639	Q9UID6	485 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	POU2F3	Q9UKI9	436 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	PROCR	Q9UNN8	238 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ERVK-19	Q9WJR5	959 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	POLR3H	Q9Y535	204 aa	Predicted RBP	4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	LRP12	Q9Y561	859 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	SESN1	Q9Y6P5	492 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	APC	P25054	2843 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	LRBA	P50851	2863 aa		4.36	□□□□□ -1.71
CCNB3-208	ENST00000493507	ADGRG4	Q8IZF6	3080 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TRGV8	A0A0C4DH27	118 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	IQANK1	A0A1B0GTG1	560 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507		A0A1B0GUH1	482 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507		A8MZ25	164 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF587B	E7ETH6	402 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CCL21	O00585	134 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SMIM24	O75264	130 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	GLS	O94925	669 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PSMG1	O95456	288 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	IGKV1D-16	P01601	117 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	HIST1H2AB	P04908	130 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CPM	P14384	443 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SDC1	P18827	310 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	GPX3	P22352	226 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	JAK1	P23458	1154 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CXCR2	P25025	360 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TIA1	P31483	386 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	FEN1	P39748	380 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RAP1GDS1	P52306	607 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	DNAJB13	P59910	316 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ERVFC1-1	P60608	527 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	EEF1A1	P68104	462 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ARG2	P78540	354 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ACSM2A	Q08AH3	577 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ASPH	Q12797	758 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	LCP2	Q13094	533 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CEBPE	Q15744	281 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	EXT1	Q16394	746 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PCGF3	Q3KNV8	242 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF791	Q3KP31	576 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	KRTAP21-3	Q3LHN1	58 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TMEM35A	Q53FP2	167 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TRMT12	Q53H54	448 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZNF628	Q5EBL2	1059 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PAGE2B	Q5JRK9	111 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PRAMEF20	Q5VT98	475 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	EEF1A1P5	Q5VTE0	462 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ACSM2B	Q68CK6	577 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RTL6	Q6ICC9	239 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	FAM71E1	Q6IPT2	247 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RPUSD3	Q6P087	351 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SLC48A1	Q6P1K1	146 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	KLC3	Q6P597	504 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	C3P1	Q6ZMU1	363 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	HIST3H2A	Q7L7L0	130 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OLIG3	Q7RTU3	272 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CCDC91	Q7Z6B0	441 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	GPR180	Q86V85	440 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SATL1	Q86VE3	508 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RPS19BP1	Q86WX3	136 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	NUDT13	Q86X67	352 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CCNYL1	Q8N7R7	359 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TTL	Q8NG68	377 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR7G2	Q8NG99	324 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR10G3	Q8NGC4	313 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR1J2	Q8NGS2	313 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR9A2	Q8NGT5	310 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	THAP6	Q8TBB0	222 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	AGR3	Q8TD06	166 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TCP10L	Q8TDR4	215 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	C16orf78	Q8WTQ4	265 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RNF138	Q8WVD3	245 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SELENOM	Q8WWX9	145 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	METTL21A	Q8WXB1	218 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ABTB1	Q969K4	478 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	MOAP1	Q96BY2	351 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ARSG	Q96EG1	525 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OTUB1	Q96FW1	271 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	VMP1	Q96GC9	406 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PGAM5	Q96HS1	289 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	TMEM109	Q9BVC6	243 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	OR8D2	Q9GZM6	311 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	WWTR1	Q9GZV5	400 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	NXF5	Q9H1B4	397 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	RPF2	Q9H7B2	306 aa	Known RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	MID1IP1	Q9NPA3	183 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	ZDHHC2	Q9UIJ5	367 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	SH3BGRL2	Q9UJC5	107 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	FBXL2	Q9UKC9	423 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	KCNS2	Q9ULS6	477 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	PLLP	Q9Y342	182 aa		4.35	□□□□□ -1.71
CCNB3-208	ENST00000493507	FIS1	Q9Y3D6	152 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms