RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CCNCP24863 283 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 KIR2DS4P43632 304 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 SH3BGRP55822 239 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 UNC119Q13432 240 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 OR5I1Q13606 314 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 MAJINQ3KP22 176 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 GPR157Q5UAW9 335 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 KDELC1Q6UW63 502 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 DHDDSQ86SQ9 333 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 NBPF5PQ86XG9 351 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 MFSD6LQ8IWD5 586 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 ZNF679Q8IYX0 411 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 C6orf223Q8N319 242 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 ZCCHC7Q8N3Z6 543 aaKnown RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 FAM133AQ8N9E0 248 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 SUMF2Q8NBJ7 301 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 CCDC54Q8NEL0 328 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 OR10G3Q8NGC4 313 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 MAGEE2Q8TD90 523 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.71□□□□□ -1.986e-6■□□□□ 9.8
CLK1-213ENST00000492793 COQ2Q96H96 371 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 ZNF641Q96N77 438 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 ZBTB18Q99592 522 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 RIOK1Q9BRS2 568 aaKnown RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 HES7Q9BYE0 225 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 GCOM2Q9BZD3 368 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 SIAEQ9HAT2 523 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 MCCC2Q9HCC0 563 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 MMP17Q9ULZ9 603 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 PIGLQ9Y2B2 252 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 ATAD2BQ9ULI0 1458 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 E9PBE3 544 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 CLDN9O95484 217 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 ICAM2P13598 275 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 MGMTP16455 207 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 NPR2P20594 1047 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 DUSP3P51452 185 aaPredicted RBP2.7□□□□□ -1.98
CLK1-213ENST00000492793 CDK16Q00536 496 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 PDIA2Q13087 525 aaKnown RBP2.7□□□□□ -1.98
CLK1-213ENST00000492793 VGLL4Q14135 290 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 FILIP1LQ4L180 1135 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 C1orf220Q5T0J3 134 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 OR2A2Q6IF42 318 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 ZNF620Q6ZNG0 422 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 PAQR7Q86WK9 346 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 RALGPS2Q86X27 583 aaPredicted RBP2.7□□□□□ -1.98
CLK1-213ENST00000492793 PLA2G4DQ86XP0 818 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 TGIF2LXQ8IUE1 241 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 NUDCD3Q8IVD9 361 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 OR1L4Q8NGR5 311 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 RNF138Q8WVD3 245 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 SLC41A3Q96GZ6 507 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 TRIM62Q9BVG3 475 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 PARD6BQ9BYG5 372 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 GBA3Q9H227 469 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 AZI2Q9H6S1 392 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 SGK2Q9HBY8 427 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 CACNG2Q9Y698 323 aa2.7□□□□□ -1.98
CLK1-213ENST00000492793 ZNFX1Q9P2E3 1918 aaKnown RBP2.7□□□□□ -1.98
CLK1-213ENST00000492793 A0A1B0GUA9 196 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 A6NDX4 124 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 OR5B21A6NL26 309 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 SNTNA6NMZ2 147 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 NBR2O15453 112 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 HCRTR1O43613 425 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 PRKAB2O43741 272 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 B4GALT2O60909 372 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 IGHV4-34P06331 123 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 NUDT1P36639 197 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 DDOSTP39656 456 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 EPS15P42566 896 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 SEC61GP60059 68 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 OGDHQ02218 1023 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 TNFRSF17Q02223 184 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 DAZ2Q13117 558 aaKnown RBP2.69□□□□□ -1.98
CLK1-213ENST00000492793 ZNF658BQ4V348 819 aaPredicted RBP2.69□□□□□ -1.98
CLK1-213ENST00000492793 ENPP6Q6UWR7 440 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 C6orf89Q6UWU4 347 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 LRRC31Q6UY01 552 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 TIFABQ6ZNK6 161 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 FAM43BQ6ZT52 329 aaPredicted RBP2.69□□□□□ -1.98
CLK1-213ENST00000492793 ZNF546Q86UE3 836 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 MKXQ8IYA7 352 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 TMEM61Q8N0U2 210 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 FAM71E2Q8N5Q1 922 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 NKAPP1Q8N9T2 125 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 Q8N9W7 124 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 LINC01555Q8NAE3 123 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 OR8J1Q8NGP2 316 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 NDRG1Q92597 394 aaKnown RBP2.69□□□□□ -1.98
CLK1-213ENST00000492793 ITCHQ96J02 903 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 IFT74Q96LB3 600 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 LINC00167Q96N53 147 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 OXGR1Q96P68 337 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 FMO2Q99518 471 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 PELOQ9BRX2 385 aaKnown RBP2.69□□□□□ -1.98
CLK1-213ENST00000492793 NT5C3AQ9H0P0 336 aa2.69□□□□□ -1.98
CLK1-213ENST00000492793 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms