RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ALKBH3Q96Q83 286 aaPredicted RBP16.08■□□□□ 0.16
SMIM4-205ENST00000491607 PIF1Q9H611 641 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 A4GALTQ9NPC4 353 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 TMEM45AQ9NWC5 275 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 RPS6KB2Q9UBS0 482 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 MOKQ9UQ07 419 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 DNHD1Q96M86 4753 aa16.08■□□□□ 0.16
SMIM4-205ENST00000491607 TMEM229AB2RXF0 380 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 POLR3GO15318 223 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-205ENST00000491607 GPRIN2O60269 458 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 LGI1O95970 557 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 APOBEC3AP31941 199 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-205ENST00000491607 RPS5P46782 204 aaKnown RBP16.07■□□□□ 0.16
SMIM4-205ENST00000491607 P2RY4P51582 365 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 DSCR9P59020 149 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 FADDQ13158 208 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 STK35Q8TDR2 534 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 BCL2L10Q9HD36 194 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 TCF7L2Q9NQB0 619 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 RASD1Q9Y272 281 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 PMF1-BGLAPU3KQ54 211 aa16.07■□□□□ 0.16
SMIM4-205ENST00000491607 CSPG4Q6UVK1 2322 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 ELOA3DA6NLF2 546 aaPredicted RBP16.06■□□□□ 0.16
SMIM4-205ENST00000491607 H7C417 338 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 NPIPB7O75200 414 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 PNMTP11086 282 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 UBE2NP61088 152 aaKnown RBP16.06■□□□□ 0.16
SMIM4-205ENST00000491607 ELOA3BQ3SY89 546 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 TBRG1Q3YBR2 411 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 C1QTNF12Q5T7M4 302 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 EPHX4Q8IUS5 362 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 KDM8Q8N371 416 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 ELOA3Q8NG57 546 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 OR10H5Q8NGA6 315 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 OR1K1Q8NGR3 316 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 MFSD8Q8NHS3 518 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 FBXO17Q96EF6 278 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 KCNS3Q9BQ31 491 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 OBP2BQ9NPH6 170 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 TLN2Q9Y4G6 2542 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 CADP27708 2225 aa16.06■□□□□ 0.16
SMIM4-205ENST00000491607 IGHV1-18A0A0C4DH31 117 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 OR6C65A6NJZ3 312 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 NR5A2O00482 541 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 BEND6Q5SZJ8 279 aaPredicted RBP16.05■□□□□ 0.16
SMIM4-205ENST00000491607 NFKBIDQ8NI38 313 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 FAM168AQ92567 244 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 SLC35B4Q969S0 331 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 KTI12Q96EK9 354 aaPredicted RBP16.05■□□□□ 0.16
SMIM4-205ENST00000491607 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 PTDSS2Q9BVG9 487 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 SLC25A37Q9NYZ2 338 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 CCDC167Q9P0B6 97 aa16.05■□□□□ 0.16
SMIM4-205ENST00000491607 CR1P17927 2039 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 A0A096LPE4 126 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 A0A1W2PPZ6 126 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 A8MV72 311 aaPredicted RBP16.04■□□□□ 0.16
SMIM4-205ENST00000491607 FTCDNL1E5RQL4 147 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 UPK3AO75631 287 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 BMP2P12643 396 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 ETS2P15036 469 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 ZNF43P17038 809 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 HOXB9P17482 250 aaPredicted RBP16.04■□□□□ 0.16
SMIM4-205ENST00000491607 EFNA4P52798 201 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 CLDN17P56750 224 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 TUBA1BP68363 451 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 TUBA4AP68366 448 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 IL1RL1Q01638 556 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 EGR4Q05215 589 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 GCNT6Q5T4J0 391 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 HMBOX1Q6NT76 420 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 TUBA1AQ71U36 451 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 LRRC8CQ8TDW0 803 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 SPDL1Q96EA4 605 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 BOD1Q96IK1 185 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 SLC38A2Q96QD8 506 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 EBF4Q9BQW3 602 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 SLAMF8Q9P0V8 285 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 SEC14L4Q9UDX3 406 aa16.04■□□□□ 0.16
SMIM4-205ENST00000491607 JMJD1CQ15652 2540 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 LY6HO94772 140 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 TGDSO95455 350 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 CRYAAP02489 173 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 SLC25A16P16260 332 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 PRKAR1BP31321 381 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 IDH3AP50213 366 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 ROR2Q01974 943 aaKnown RBP16.03■□□□□ 0.16
SMIM4-205ENST00000491607 C1DQ13901 141 aaKnown RBP16.03■□□□□ 0.16
SMIM4-205ENST00000491607 TMEM249Q2WGJ8 235 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 LRIF1Q5T3J3 769 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 BLOC1S3Q6QNY0 202 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 KRT73Q86Y46 540 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 HIPK1Q86Z02 1210 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 FUNDC1Q8IVP5 155 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 MSRB3Q8IXL7 192 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 RNF217Q8TC41 542 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 BCL2L2Q92843 193 aaPredicted RBP16.03■□□□□ 0.16
SMIM4-205ENST00000491607 TNFRSF13CQ96RJ3 184 aa16.03■□□□□ 0.16
SMIM4-205ENST00000491607 SLCO1B3Q9NPD5 702 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms