RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C1orf162Q8NEQ5 155 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 GTPBP3Q969Y2 492 aaKnown RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 SLC25A36Q96CQ1 311 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 KTI12Q96EK9 354 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 RADILQ96JH8 1075 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 CPPED1Q9BRF8 314 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 ZNF385DQ9H6B1 395 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM38AQ9H6F2 299 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 VIPAS39Q9H9C1 493 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 MGAT4BQ9UQ53 548 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 A0A1B0GWA3 101 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 VAMP5O95183 116 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 AHSA1O95433 338 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 PNMTP11086 282 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 SELENOPP49908 381 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 SCARB2Q14108 478 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 CLEC12BQ2HXU8 276 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 B3GLCTQ6Y288 498 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 POMGNT2Q8NAT1 580 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 STON2Q8WXE9 905 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 BOD1Q96IK1 185 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 WFDC6Q9BQY6 131 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 C12orf10Q9HB07 376 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 SEC14L4Q9UDX3 406 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 GDF2Q9UK05 429 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-219ENST00000491183 RASD1Q9Y272 281 aa15.77■□□□□ 0.12
HMGN1-219ENST00000491183 FN1P02751 2386 aaKnown RBP15.77■□□□□ 0.11
HMGN1-219ENST00000491183 IGKV1D-42A0A075B6H8 117 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 ELOA3DA6NLF2 546 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-219ENST00000491183 EVPLLA8MZ36 301 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 TPST2O60704 377 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
HMGN1-219ENST00000491183 FZD7O75084 574 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 IGHV4-39P01824 125 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 CDH2P19022 906 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-219ENST00000491183 SLC6A2P23975 617 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 ACVR1BP36896 505 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 TGFBR3Q03167 851 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 ELOA3BQ3SY89 546 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 SLC22A25Q6T423 547 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 LINGO2Q7L985 606 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 RETREG3Q86VR2 466 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 KRT73Q86Y46 540 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 ELOA3Q8NG57 546 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 TAAR8Q969N4 342 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 SPATA5L1Q9BVQ7 753 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 RABEP2Q9H5N1 569 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 RPS6KB2Q9UBS0 482 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 B3GALT5Q9Y2C3 310 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 AMDHD2Q9Y303 409 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 PLCE1Q9P212 2302 aa15.76■□□□□ 0.11
HMGN1-219ENST00000491183 UPK3AO75631 287 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 MFN2O95140 757 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 AQP1P29972 269 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 TTKP33981 857 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 PRPS1P60891 318 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 HIKESHIQ53FT3 197 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 AGAP6Q5VW22 663 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 C11orf71Q6IPW1 123 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 NIPAL3Q6P499 406 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 DNM1P46Q6ZS02 220 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 PTOV1Q86YD1 416 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 HIPK4Q8NE63 616 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 DHRS9Q9BPW9 319 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 ALG2Q9H553 416 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 B3GAT1Q9P2W7 334 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 LEF1Q9UJU2 399 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-219ENST00000491183 CORO2BQ9UQ03 480 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 NDUFAF1Q9Y375 327 aa15.75■□□□□ 0.11
HMGN1-219ENST00000491183 CSPG4Q6UVK1 2322 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 NSD1Q96L73 2696 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-219ENST00000491183 SASH3O75995 380 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 LGI1O95970 557 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 DMTNQ08495 405 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 VEZF1Q14119 521 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 SELPLGQ14242 412 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ETFDHQ16134 617 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ALG10BQ5I7T1 473 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ULK3Q6PHR2 472 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 DPP10Q8N608 796 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 MAPK1IP1LQ8NDC0 245 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 OR1K1Q8NGR3 316 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 DNAJA4Q8WW22 397 aaPredicted RBP15.74■□□□□ 0.11
HMGN1-219ENST00000491183 SLC38A4Q969I6 547 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ANKRD27Q96NW4 1050 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ZNF607Q96SK3 696 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 NPHS2Q9NP85 383 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 CBLN4Q9NTU7 201 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 FAIMQ9NVQ4 179 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 POU2F3Q9UKI9 436 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ALPK2Q86TB3 2170 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 ZANQ9Y493 2812 aa15.74■□□□□ 0.11
HMGN1-219ENST00000491183 PRORSD1PA6NEY8 169 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 RNF223E7ERA6 249 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 M0R082 166 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 OR2T1O43869 369 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 KRT33AO76009 404 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 ZNF432O94892 652 aa15.73■□□□□ 0.11
HMGN1-219ENST00000491183 CBLP22681 906 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms