RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 BFARQ9NZS9 450 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 SEC14L3Q9UDX4 400 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 ZNF225Q9UK10 706 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 ADAM28Q9UKQ2 775 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 TMCC3Q9ULS5 477 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 CACNG2Q9Y698 323 aa2.59□□□□□ -1.99
CD46-216ENST00000490278 NSG1A0A0A6YYJ2 146 aa2.58□□□□□ -2
CD46-216ENST00000490278 PCP4L1A6NKN8 68 aa2.58□□□□□ -2
CD46-216ENST00000490278 CAPN1P07384 714 aa2.58□□□□□ -2
CD46-216ENST00000490278 CHTF8P0CG12 524 aa2.58□□□□□ -2
CD46-216ENST00000490278 ICAM2P13598 275 aa2.58□□□□□ -2
CD46-216ENST00000490278 NCK1P16333 377 aa2.58□□□□□ -2
CD46-216ENST00000490278 VDAC2P45880 294 aaPredicted RBP2.58□□□□□ -2
CD46-216ENST00000490278 SH3BGRP55822 239 aaPredicted RBP2.58□□□□□ -2
CD46-216ENST00000490278 UBE2HP62256 183 aa2.58□□□□□ -2
CD46-216ENST00000490278 UNC119Q13432 240 aa2.58□□□□□ -2
CD46-216ENST00000490278 ATP6AP1Q15904 470 aa2.58□□□□□ -2
CD46-216ENST00000490278 RALGPS2Q86X27 583 aaPredicted RBP2.58□□□□□ -2
CD46-216ENST00000490278 TBC1D21Q8IYX1 336 aa2.58□□□□□ -2
CD46-216ENST00000490278 OR9G1Q8NH87 305 aa2.58□□□□□ -2
CD46-216ENST00000490278 MAGEE2Q8TD90 523 aaPredicted RBP2.58□□□□□ -2
CD46-216ENST00000490278 BLOC1S5Q8TDH9 187 aa2.58□□□□□ -2
CD46-216ENST00000490278 ARPC1AQ92747 370 aa2.58□□□□□ -2
CD46-216ENST00000490278 TM4SF19Q96DZ7 209 aa2.58□□□□□ -2
CD46-216ENST00000490278 OXGR1Q96P68 337 aa2.58□□□□□ -2
CD46-216ENST00000490278 MTMR9Q96QG7 549 aa2.58□□□□□ -2
CD46-216ENST00000490278 PSKH2Q96QS6 385 aa2.58□□□□□ -2
CD46-216ENST00000490278 COPS8Q99627 209 aa2.58□□□□□ -2
CD46-216ENST00000490278 CCT7Q99832 543 aa2.58□□□□□ -2
CD46-216ENST00000490278 OR11A1Q9GZK7 315 aa2.58□□□□□ -2
CD46-216ENST00000490278 ACTR6Q9GZN1 396 aa2.58□□□□□ -2
CD46-216ENST00000490278 ROGDIQ9GZN7 287 aa2.58□□□□□ -2
CD46-216ENST00000490278 HOXC10Q9NYD6 342 aa2.58□□□□□ -2
CD46-216ENST00000490278 CLEC4AQ9UMR7 237 aa2.58□□□□□ -2
CD46-216ENST00000490278 A0A1W2PNU3 283 aaPredicted RBP2.57□□□□□ -2
CD46-216ENST00000490278 HSD17B6O14756 317 aa2.57□□□□□ -2
CD46-216ENST00000490278 NBR2O15453 112 aa2.57□□□□□ -2
CD46-216ENST00000490278 CA11O75493 328 aa2.57□□□□□ -2
CD46-216ENST00000490278 CLDN9O95484 217 aa2.57□□□□□ -2
CD46-216ENST00000490278 GIPP09681 153 aaPredicted RBP2.57□□□□□ -2
CD46-216ENST00000490278 CMA1P23946 247 aa2.57□□□□□ -2
CD46-216ENST00000490278 FMO3P31513 532 aa2.57□□□□□ -2
CD46-216ENST00000490278 MAGEA8P43361 318 aa2.57□□□□□ -2
CD46-216ENST00000490278 CSNK1DP48730 415 aa2.57□□□□□ -2
CD46-216ENST00000490278 CEBPDP49716 269 aaPredicted RBP2.57□□□□□ -2
CD46-216ENST00000490278 ATP1B3P54709 279 aa2.57□□□□□ -2
CD46-216ENST00000490278 AIF1P55008 147 aa2.57□□□□□ -2
CD46-216ENST00000490278 ACTR1AP61163 376 aa2.57□□□□□ -2
CD46-216ENST00000490278 PLD1Q13393 1074 aa2.57□□□□□ -2
CD46-216ENST00000490278 OR5I1Q13606 314 aa2.57□□□□□ -2
CD46-216ENST00000490278 FILIP1LQ4L180 1135 aa2.57□□□□□ -2
CD46-216ENST00000490278 CASC1Q6TDU7 716 aa2.57□□□□□ -2
CD46-216ENST00000490278 C6orf89Q6UWU4 347 aa2.57□□□□□ -2
CD46-216ENST00000490278 ACP7Q6ZNF0 438 aa2.57□□□□□ -2
CD46-216ENST00000490278 RGS9BPQ6ZS82 235 aa2.57□□□□□ -2
CD46-216ENST00000490278 Q6ZVH6 145 aa2.57□□□□□ -2
CD46-216ENST00000490278 PAQR7Q86WK9 346 aa2.57□□□□□ -2
CD46-216ENST00000490278 MFSD6LQ8IWD5 586 aa2.57□□□□□ -2
CD46-216ENST00000490278 LRRC75A-AS1Q8N1F1 130 aa2.57□□□□□ -2
CD46-216ENST00000490278 TRPV1Q8NER1 839 aa2.57□□□□□ -2
CD46-216ENST00000490278 FANK1Q8TC84 345 aa2.57□□□□□ -2
CD46-216ENST00000490278 SCFD1Q8WVM8 642 aa2.57□□□□□ -2
CD46-216ENST00000490278 ITCHQ96J02 903 aa2.57□□□□□ -2
CD46-216ENST00000490278 FCRL1Q96LA6 429 aa2.57□□□□□ -2
CD46-216ENST00000490278 NT5C3AQ9H0P0 336 aa2.57□□□□□ -2
CD46-216ENST00000490278 RNF167Q9H6Y7 350 aa2.57□□□□□ -2
CD46-216ENST00000490278 MCCC2Q9HCC0 563 aa2.57□□□□□ -2
CD46-216ENST00000490278 IL26Q9NPH9 171 aa2.57□□□□□ -2
CD46-216ENST00000490278 ZNF331Q9NQX6 463 aaPredicted RBP2.57□□□□□ -2
CD46-216ENST00000490278 KCNIP1Q9NZI2 227 aa2.57□□□□□ -2
CD46-216ENST00000490278 ATP10AO60312 1499 aa2.57□□□□□ -2
CD46-216ENST00000490278 GTF3C1Q12789 2109 aa2.56□□□□□ -2
CD46-216ENST00000490278 IL1BP01584 269 aa2.56□□□□□ -2
CD46-216ENST00000490278 ZNF853P0CG23 659 aa2.56□□□□□ -2
CD46-216ENST00000490278 PSG2P11465 335 aa2.56□□□□□ -2
CD46-216ENST00000490278 ABOP16442 354 aa2.56□□□□□ -2
CD46-216ENST00000490278 RCC1P18754 421 aaPredicted RBP2.56□□□□□ -2
CD46-216ENST00000490278 OPRD1P41143 372 aa2.56□□□□□ -2
CD46-216ENST00000490278 SSR1P43307 286 aaKnown RBP2.56□□□□□ -2
CD46-216ENST00000490278 GSSP48637 474 aa2.56□□□□□ -2
CD46-216ENST00000490278 CDK16Q00536 496 aa2.56□□□□□ -2
CD46-216ENST00000490278 GPR157Q5UAW9 335 aa2.56□□□□□ -2
CD46-216ENST00000490278 CYB5R2Q6BCY4 276 aa2.56□□□□□ -2
CD46-216ENST00000490278 CTRB2Q6GPI1 263 aa2.56□□□□□ -2
CD46-216ENST00000490278 ZNF620Q6ZNG0 422 aa2.56□□□□□ -2
CD46-216ENST00000490278 UTS2BQ765I0 119 aa2.56□□□□□ -2
CD46-216ENST00000490278 DHDDSQ86SQ9 333 aa2.56□□□□□ -2
CD46-216ENST00000490278 TRIM69Q86WT6 500 aa2.56□□□□□ -2
CD46-216ENST00000490278 ECHDC2Q86YB7 292 aa2.56□□□□□ -2
CD46-216ENST00000490278 ZNF679Q8IYX0 411 aa2.56□□□□□ -2
CD46-216ENST00000490278 ZCCHC7Q8N3Z6 543 aaKnown RBP2.56□□□□□ -2
CD46-216ENST00000490278 ZNF433Q8N7K0 673 aaPredicted RBP2.56□□□□□ -2
CD46-216ENST00000490278 ACOT4Q8N9L9 421 aa2.56□□□□□ -2
CD46-216ENST00000490278 FNDC5Q8NAU1 212 aa2.56□□□□□ -2
CD46-216ENST00000490278 FAM83FQ8NEG4 500 aaPredicted RBP2.56□□□□□ -2
CD46-216ENST00000490278 NDRG1Q92597 394 aaKnown RBP2.56□□□□□ -2
CD46-216ENST00000490278 C10orf35Q96D05 121 aa2.56□□□□□ -2
CD46-216ENST00000490278 OR2M2Q96R28 347 aa2.56□□□□□ -2
CD46-216ENST00000490278 TMEM246Q9BRR3 403 aa2.56□□□□□ -2
CD46-216ENST00000490278 SLC39A3Q9BRY0 314 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms