RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RPL13AP3Q6NVV1 102 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 LINGO2Q7L985 606 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 OR6C4Q8NGE1 309 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 ZNF563Q8TA94 476 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 C3orf49Q96BT1 292 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 MESP1Q9BRJ9 268 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 IKZF2Q9UKS7 526 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 THADAQ6YHU6 1953 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 FMO6PO60774 539 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 AK1P00568 194 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 NPR2P20594 1047 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 CTXN1P60606 82 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 METAP1DQ6UB28 335 aaPredicted RBP14.36□□□□□ -0.11
BRD9-208ENST00000489816 ASB12Q8WXK4 309 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 SLC25A36Q96CQ1 311 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 ZNF426Q9BUY5 554 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 NANSQ9NR45 359 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 C14orf105Q9NVL8 296 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 ING3Q9NXR8 418 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 TEKT2Q9UIF3 430 aa14.36□□□□□ -0.11
BRD9-208ENST00000489816 TMA7Q9Y2S6 64 aaKnown RBP14.36□□□□□ -0.11
BRD9-208ENST00000489816 RGS13O14921 159 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 ZFPL1O95159 310 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 HLA-DQB1P01920 261 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 SLC6A1P30531 599 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 HTR2BP41595 481 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 RPS11P62280 158 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRD9-208ENST00000489816 GPLD1P80108 840 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 TOMM34Q15785 309 aaPredicted RBP14.35□□□□□ -0.11
BRD9-208ENST00000489816 CEP78Q5JTW2 689 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 C1orf189Q5VU69 101 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 KIAA0895LQ68EN5 471 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 C16orf47Q6ZP98 133 aaPredicted RBP14.35□□□□□ -0.11
BRD9-208ENST00000489816 ACOT12Q8WYK0 555 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 SNAPC3Q92966 411 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 CACNG6Q9BXT2 260 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 UCKL1Q9NWZ5 548 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 ITGB1BP2Q9UKP3 347 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 MRPS33Q9Y291 106 aaKnown RBP14.35□□□□□ -0.11
BRD9-208ENST00000489816 SLC6A5Q9Y345 797 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 URB1O60287 2271 aaKnown RBP14.35□□□□□ -0.11
BRD9-208ENST00000489816 C2orf72A6NCS6 295 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 PIN1P1O15428 100 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 OR2B3O76000 313 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 FBXO45P0C2W1 286 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 BTCP35070 178 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 CCINQ13939 588 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 HSD17B12Q53GQ0 312 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 VWA2Q5GFL6 755 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 FCRLAQ7L513 359 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 ZNF550Q7Z398 422 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 NANOGNBQ7Z5D8 188 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 KTI12Q96EK9 354 aaPredicted RBP14.35□□□□□ -0.11
BRD9-208ENST00000489816 ALG12Q9BV10 488 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 MED28Q9H204 178 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 FBRSQ9HAH7 460 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 HS3ST3A1Q9Y663 406 aa14.35□□□□□ -0.11
BRD9-208ENST00000489816 A0A087WUJ7 227 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 PRAMEF2O60811 474 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 PROS1P07225 676 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 GZMKP49863 264 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 RPS15P62841 145 aaKnown RBP14.34□□□□□ -0.11
BRD9-208ENST00000489816 GALK2Q01415 458 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 BDH1Q02338 343 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 ZP2Q05996 745 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 SLC36A2Q495M3 483 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 PXKQ7Z7A4 578 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 OR10AC1Q8NH08 325 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 IGKV1D-42A0A075B6H8 117 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 WNT1P04628 370 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 HLA-DMAP28067 261 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 CD1CP29017 333 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 LRRC69Q6ZNQ3 347 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 CMTM4Q8IZR5 234 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 KDM8Q8N371 416 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 LSMEM1Q8N8F7 131 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 LSM14AQ8ND56 463 aaKnown RBP14.34□□□□□ -0.11
BRD9-208ENST00000489816 AKAP1Q92667 903 aaKnown RBP eCLIP14.34□□□□□ -0.11
BRD9-208ENST00000489816 YIPF5Q969M3 257 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 LMF2Q9BU23 707 aaKnown RBP14.34□□□□□ -0.11
BRD9-208ENST00000489816 KLK11Q9UBX7 282 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 HCRTR2O43614 444 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 MAS1P04201 325 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 OR2T7P0C7T2 308 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 GRK6P43250 576 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 YIF1BQ5BJH7 314 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 OR2T27Q8NH04 317 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 THAP3Q8WTV1 239 aaPredicted RBP14.34□□□□□ -0.11
BRD9-208ENST00000489816 THEM6Q8WUY1 208 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 PPP1R14AQ96A00 147 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 ADAD1Q96M93 576 aaKnown RBP14.34□□□□□ -0.11
BRD9-208ENST00000489816 GDF15Q99988 308 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 WDR76Q9H967 626 aa14.34□□□□□ -0.11
BRD9-208ENST00000489816 SDK2Q58EX2 2172 aa14.33□□□□□ -0.11
BRD9-208ENST00000489816 FREM3P0C091 2139 aa14.33□□□□□ -0.11
BRD9-208ENST00000489816 SC5DO75845 299 aa14.33□□□□□ -0.12
BRD9-208ENST00000489816 SRMP19623 302 aa14.33□□□□□ -0.12
BRD9-208ENST00000489816 CFL1P23528 166 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms