RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF774Q6NX45 483 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 CLEC2AQ6UVW9 174 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 PAMR1Q6UXH9 720 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 LRRC74BQ6ZQY2 392 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 BZW1Q7L1Q6 419 aaKnown RBP3.2□□□□□ -1.9
XRN1-213ENST00000489241 ARCQ7LC44 396 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 PPP1R27Q86WC6 154 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ZNF677Q86XU0 584 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 FTMTQ8N4E7 242 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 TYMSOSQ8TAI1 123 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 BRSK1Q8TDC3 778 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 STARD8Q92502 1023 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 MCUR1Q96AQ8 359 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 FGGYQ96C11 551 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 CMTM7Q96FZ5 175 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 PAXXQ9BUH6 204 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 FAIM2Q9BWQ8 316 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 Q9H3A6 140 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ZNF702PQ9H963 129 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 FOLH1BQ9HBA9 442 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 INPP5EQ9NRR6 644 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 SLC7A10Q9NS82 523 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 Q9UF83 564 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 PHLPP2Q6ZVD8 1323 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 IGHV1OR21-1A0A087WYE8 117 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 IGHV7-81A0A0B4J1V7 117 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 NCF1BA6NI72 391 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 NCF1CA8MVU1 366 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 LOC110117498-PIK3R3F6TDL0 507 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 WRBO00258 174 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 DLGAP1O14490 977 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 CASQ2O14958 399 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 PSTPIP1O43586 416 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 HCRTR1O43613 425 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 DNAJB6O75190 326 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 LYPLA1O75608 230 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 FTH1P02794 183 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 THY1P04216 161 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 SEMG1P04279 462 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 GIG44P09565 113 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 UBTFL1P0CB47 393 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 SHMT2P34897 504 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 MEOX2P50222 304 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 ACLYP53396 1101 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 RPS15P62841 145 aaKnown RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 PARP15Q460N3 678 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 SAMD4BQ5PRF9 694 aaKnown RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 SLC8B1Q6J4K2 584 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 WDR74Q6RFH5 385 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 SASS6Q6UVJ0 657 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 UNQ9370/PRO34162Q6UXP9 181 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 GDPD3Q7L5L3 318 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 NIPA1Q7RTP0 329 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 VRK2Q86Y07 508 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 OFCC1Q8IZS5 231 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 BBOF1Q8ND07 529 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 OR7G2Q8NG99 324 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 OR4C5Q8NGB2 326 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 OR6C4Q8NGE1 309 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 RHOXF1Q8NHV9 184 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 FAM81AQ8TBF8 368 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 PLPPR1Q8TBJ4 325 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 ACMSDQ8TDX5 336 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 ZNF184Q99676 751 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 KIR2DL4Q99706 377 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 BPIFA3Q9BQP9 254 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 C11orf70Q9BRQ4 267 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 ILKAPQ9H0C8 392 aaPredicted RBP3.19□□□□□ -1.9
XRN1-213ENST00000489241 ZNF160Q9HCG1 818 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 KLHL21Q9UJP4 597 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
XRN1-213ENST00000489241 NSG1A0A0A6YYJ2 146 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 GOLGA6L7A0A1B0GV03 622 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 TBL1XO60907 577 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 IGHV3-23P01764 117 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 ABOP16442 354 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 NTSP30990 170 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 GPM6AP51674 278 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 C21orf59P57076 290 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 EGFEM1PQ0D2K5 195 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 TGFBIQ15582 683 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 MARC1Q5VT66 337 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 MOB1BQ7L9L4 216 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 ASCL5Q7RTU5 278 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 SLC26A11Q86WA9 606 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 APOBEC3FQ8IUX4 373 aaKnown RBP3.18□□□□□ -1.9
XRN1-213ENST00000489241 PIANPQ8IYJ0 282 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 RDH10Q8IZV5 341 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 C6orf223Q8N319 242 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 ACOT4Q8N9L9 421 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 B3GNT7Q8NFL0 401 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 PYROXD1Q8WU10 500 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 SLC38A4Q969I6 547 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 TSNARE1Q96NA8 513 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 MS4A4EQ96PG1 132 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 TGS1Q96RS0 853 aaKnown RBP3.18□□□□□ -1.9
XRN1-213ENST00000489241 DEFB126Q9BYW3 111 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 ACTR6Q9GZN1 396 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 GEMIN7Q9H840 131 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms