RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 LIPT2A6NK58 231 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FAM166BA8MTA8 275 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ACOT7O00154 380 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 RNF13O43567 381 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 RGS10O43665 173 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 IDH3BO43837 385 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ZIC3O60481 467 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 CD14P08571 375 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ADORA3P0DMS8 318 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 AHCYP23526 432 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 RFC3P40938 356 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ID4P47928 161 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 MEOX1P50221 254 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 TNFSF10P50591 281 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 OR2B6P58173 313 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 CTXN1P60606 82 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ERVK-25P63136 954 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 TUBA4AP68366 448 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FOXK1P85037 733 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FOXK2Q01167 660 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 LTBQ06643 244 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FOXO1Q12778 655 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 APOFQ13790 326 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 SLC25A30Q5SVS4 291 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 AHSA2Q719I0 299 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 CXXC5Q7LFL8 322 aaKnown RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 GALNTL5Q7Z4T8 443 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 YRDCQ86U90 279 aaKnown RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 JAZF1Q86VZ6 243 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 GID4Q8IVV7 300 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 SPACA3Q8IXA5 215 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 LSM14AQ8ND56 463 aaKnown RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 FAM83FQ8NEG4 500 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 SMPDL3BQ92485 455 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 MYDGFQ969H8 173 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FAM122AQ96E09 287 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ARL5BQ96KC2 179 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ZNF582Q96NG8 517 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 UBL7Q96S82 380 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 COPS4Q9BT78 406 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 TTTY12Q9BZ98 90 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 FN3KQ9H479 309 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ZNF703Q9H7S9 590 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 CHST11Q9NPF2 352 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 BATF3Q9NR55 127 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 INIPQ9NRY2 104 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 PLCXD1Q9NUJ7 323 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 DKK4Q9UBT3 224 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 RPL36Q9Y3U8 105 aaKnown RBP9.03□□□□□ -0.96
USP11-211ENST00000489111 IER3IP1Q9Y5U9 82 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 PTPRBP23467 1997 aa9.03□□□□□ -0.96
USP11-211ENST00000489111 TRAV17A0A0B4J275 112 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 TEX13CA0A0J9YWL9 993 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 TRIM64A6NGJ6 449 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 CLCA1A8K7I4 914 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 KDM4EB2RXH2 506 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 FTCDNL1E5RQL4 147 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 PRR23D1E9PI22 279 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 C11orf98E9PRG8 122 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 LINC01387J3KSC0 135 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 SULT2B1O00204 365 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 PLPP3O14495 311 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 IMPA2O14732 288 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 ARPC3O15145 178 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 PRODHO43272 600 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 EFNA2O43921 213 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 MRPS14O60783 128 aaKnown RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 CEACAM4O75871 244 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 SLC2A10O95528 541 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 OPN1LWP04000 364 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 F13BP05160 661 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 PRR23D2P0DMB1 279 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 IMPDH2P12268 514 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 APEHP13798 732 aaKnown RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 ACVR2AP27037 513 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 CDH11P55287 796 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 RAC1P63000 192 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 SLC35A1P78382 337 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 TLE3Q04726 772 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 ZNF91Q05481 1191 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP11-211ENST00000489111 PUDPQ08623 228 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 WIPI1Q5MNZ9 446 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 PLBD1Q6P4A8 553 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 BCDIN3DQ7Z5W3 292 aaKnown RBP9.02□□□□□ -0.97
USP11-211ENST00000489111 SLC22A16Q86VW1 577 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 CPOQ8IVL8 374 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 STX19Q8N4C7 294 aa9.02□□□□□ -0.97
USP11-211ENST00000489111 ZADH2Q8N4Q0 377 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms