RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	SEC61A2	Q9H9S3	476 aa		11.24	□□□□□ -0.61
WDR46-238	ENST00000488944	TMEM45A	Q9NWC5	275 aa		11.24	□□□□□ -0.61
WDR46-238	ENST00000488944	CHST2	Q9Y4C5	530 aa		11.24	□□□□□ -0.61
WDR46-238	ENST00000488944		A0A096LPE4	126 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944		A0A1W2PPZ6	126 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC35F4	A4IF30	521 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944		A8MVM7	634 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	ZNF587B	E7ETH6	402 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	HDAC3	O15379	428 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	LMX1B	O60663	402 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	UPK3A	O75631	287 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	ANP32D	O95626	131 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	F12	P00748	615 aa	Predicted RBP	11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	NCF2	P19878	526 aa	Predicted RBP	11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	IGFBP5	P24593	272 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	PDLIM4	P50479	330 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	CRISP3	P54108	245 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	WDR4	P57081	412 aa	Known RBP	11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	COPZ1	P61923	177 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	HOXC5	Q00444	222 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	LRRC74A	Q0VAA2	488 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	C1orf140	Q5VVS0	124 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	PRAMEF8	Q5VWM4	474 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	PRAMEF7	Q5VXH5	474 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	ATG16L1	Q676U5	607 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	SERPINA11	Q86U17	422 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	EPHX4	Q8IUS5	362 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	MGARP	Q8TDB4	240 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC38A5	Q8WUX1	472 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC25A36	Q96CQ1	311 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	TMEM19	Q96HH6	336 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	VRK1	Q99986	396 aa	Predicted RBP	11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	KCNS3	Q9BQ31	491 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	PARD6B	Q9BYG5	372 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	SHARPIN	Q9H0F6	387 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	NELFA	Q9H3P2	528 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	FKBP7	Q9Y680	259 aa		11.23	□□□□□ -0.61
WDR46-238	ENST00000488944	VWC2L	B2RUY7	222 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	TMEM229A	B2RXF0	380 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	NPIPB7	O75200	414 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	AHSA1	O95433	338 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	CRYAA	P02489	173 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	NUDT7	P0C024	238 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	TFPT	P0C1Z6	253 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	CECR9	P0C854	216 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	NR4A2	P43354	598 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	GZMK	P49863	264 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	UBE2N	P61088	152 aa	Known RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	SNRPD2	P62316	118 aa	Known RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	LARS2	Q15031	903 aa	Known RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	KRTAP24-1	Q3LI83	254 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC9B1	Q4ZJI4	515 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	PDCD4	Q53EL6	469 aa	Known RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	RNF220	Q5VTB9	566 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC46A3	Q7Z3Q1	461 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	MYPOP	Q86VE0	399 aa	Predicted RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	OR9I1	Q8NGQ6	314 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	BCL2L2	Q92843	193 aa	Predicted RBP	11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	VPS33A	Q96AX1	596 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	FOXN4	Q96NZ1	517 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	PIMREG	Q9BSJ6	248 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	PRR14	Q9BWN1	585 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	PIF1	Q9H611	641 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	TPT1P8	Q9HAU6	139 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	OBP2B	Q9NPH6	170 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	CA10	Q9NS85	328 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	TMEM160	Q9NX00	188 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	CALML5	Q9NZT1	146 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	SEC14L4	Q9UDX3	406 aa		11.22	□□□□□ -0.61
WDR46-238	ENST00000488944	IGHV4-61	A0A0C4DH41	118 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	LOC100289279	A0A1B0GTE1	492 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	TRPC5OS	A6NMA1	111 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	FTCDNL1	E5RQL4	147 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	SNN	O75324	88 aa	Predicted RBP	11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	SLC22A3	O75751	556 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	VAMP5	O95183	116 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	IL6	P05231	212 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	CELA3B	P08861	270 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	PNMT	P11086	282 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	APEH	P13798	732 aa	Known RBP	11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	IDO1	P14902	403 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	CALCR	P30988	508 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	SERPINF1	P36955	418 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	RPS5	P46782	204 aa	Known RBP	11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	CLDN17	P56750	224 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	ROR2	Q01974	943 aa	Known RBP	11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	NAAA	Q02083	359 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	ADIPOQ	Q15848	244 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	C6orf10	Q5SRN2	563 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	C1QTNF12	Q5T7M4	302 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	ANKRD16	Q6P6B7	361 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	MAVS	Q7Z434	540 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	MSI2	Q96DH6	328 aa	Known RBP	11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	BOD1	Q96IK1	185 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	KATNB1	Q9BVA0	655 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	PTDSS2	Q9BVG9	487 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	SPATA9	Q9BWV2	254 aa		11.21	□□□□□ -0.61
WDR46-238	ENST00000488944	THAP1	Q9NVV9	213 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms