RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
NELFA-215ENST00000488452 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
NELFA-215ENST00000488452 CDKN2CP42773 168 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 P2RY4P51582 365 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 LGALS3BPQ08380 585 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 BNIP2Q12982 314 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 MAPK11Q15759 364 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 COX20Q5RI15 118 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 LIPNQ5VXI9 398 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 OGFOD2Q6N063 350 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 VRK2Q86Y07 508 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 FAM169BQ8N8A8 192 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 OR4F15Q8NGB8 312 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
NELFA-215ENST00000488452 TMEM109Q9BVC6 243 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 PLK3Q9H4B4 646 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
NELFA-215ENST00000488452 HAO1Q9UJM8 370 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
NELFA-215ENST00000488452 A0A096LPE4 126 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 A0A1W2PPZ6 126 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 UPK3AO75631 287 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 STAMBPO95630 424 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 KRT75O95678 551 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 TFPTP0C1Z6 253 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 CECR9P0C854 216 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 PPOXP50336 477 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 IDH3GP51553 393 aaPredicted RBP13.18□□□□□ -0.3
NELFA-215ENST00000488452 ZSWIM7Q19AV6 140 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 LIN52Q52LA3 116 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 C1orf140Q5VVS0 124 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 PRAMEF8Q5VWM4 474 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 PRAMEF7Q5VXH5 474 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 NIPAL3Q6P499 406 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 LINGO2Q7L985 606 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 EPHX4Q8IUS5 362 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 LINC00470Q9BZP3 86 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 PNPOQ9NVS9 261 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 CALML5Q9NZT1 146 aa13.18□□□□□ -0.3
NELFA-215ENST00000488452 A0A096LPI6 279 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 FRS3O43559 492 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 IGLV1-44P01699 117 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 ALDOCP09972 364 aaKnown RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 NCF2P19878 526 aaPredicted RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 BGNP21810 368 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 GIFP27352 417 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 IL12AP29459 219 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 CALCRP30988 508 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 VSNL1P62760 191 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 TUBA1BP68363 451 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 TUBA4AP68366 448 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 STX3Q13277 289 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 CR1LQ2VPA4 569 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 NUP37Q8NFH4 326 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 STK35Q8TDR2 534 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 AENQ8WTP8 325 aaKnown RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 NEU4Q8WWR8 484 aaPredicted RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
NELFA-215ENST00000488452 AIG1Q9NVV5 245 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 P2RX2Q9UBL9 471 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
NELFA-215ENST00000488452 DSPPQ9NZW4 1301 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 RFXANKO14593 260 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 TM9SF1O15321 606 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 NPIPB7O75200 414 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 IGKV3-15P01624 115 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ERCC1P07992 297 aaPredicted RBP13.16□□□□□ -0.3
NELFA-215ENST00000488452 DAOP14920 347 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 CBR1P16152 277 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 CHN2P52757 468 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ROR2Q01974 943 aaKnown RBP13.16□□□□□ -0.3
NELFA-215ENST00000488452 HGFACQ04756 655 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
NELFA-215ENST00000488452 RNF220Q5VTB9 566 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ANKK1Q8NFD2 765 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 MFSD8Q8NHS3 518 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 SLC25A36Q96CQ1 311 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 DOK1Q99704 481 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 NELFAQ9H3P2 528 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ZNF442Q9H7R0 627 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 SEC61A2Q9H9S3 476 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
NELFA-215ENST00000488452 GPR45Q9Y5Y3 372 aa13.16□□□□□ -0.3
NELFA-215ENST00000488452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.16□□□□□ -0.34e-9■■■□□ 16.4
NELFA-215ENST00000488452 LRP5LA4QPB2 252 aa13.15□□□□□ -0.3
NELFA-215ENST00000488452 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
NELFA-215ENST00000488452 FTCDNL1E5RQL4 147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms