RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TIMM10P62072 90 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 BCL2L1Q07817 233 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 WASHC5Q12768 1159 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 GAMTQ14353 236 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 KCNJ11Q14654 390 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 UBE2V2Q15819 145 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 OTPQ5XKR4 325 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 BTNL3Q6UXE8 466 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 HACD2Q6Y1H2 254 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 SNX32Q86XE0 403 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 ECHDC2Q86YB7 292 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 DEFB119Q8N690 84 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 SLC13A3Q8WWT9 602 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 RSPH1Q8WYR4 309 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 ART4Q93070 314 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 CCDC47Q96A33 483 aaKnown RBP3□□□□□ -1.93
ITGB1-214ENST00000488427 TM2D1Q9BX74 207 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 PTGES2Q9H7Z7 377 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 RPS6KB2Q9UBS0 482 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 CRLS1Q9UJA2 301 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 GMPPBQ9Y5P6 360 aa3□□□□□ -1.93
ITGB1-214ENST00000488427 MYOFQ9NZM1 2061 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 OBSL1O75147 1896 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 ZNF469Q96JG9 3925 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 HIVEP2P31629 2446 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 CACNA1CQ13936 2221 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SMIM28A0A1B0GU29 152 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 WASHC1A8K0Z3 465 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 B4DXG7 233 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 H3BMH7 237 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 CIAO1O76071 339 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 IGHV3-23P01764 117 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 UQCRBP14927 111 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 EFNA3P52797 238 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 BDH1Q02338 343 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 PLOD1Q02809 727 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 ZKSCAN8Q15776 578 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 OR2B11Q5JQS5 317 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 OR8G2PQ6IF36 304 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 KDM7AQ6ZMT4 941 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 DNM1P46Q6ZS02 220 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 FRA10AC1Q70Z53 315 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 PPP1R27Q86WC6 154 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 CCDC36Q8IYA8 594 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 ZNF100Q8IYN0 542 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 KDM8Q8N371 416 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 BPIFB2Q8N4F0 458 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 ZSCAN4Q8NAM6 433 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 DQX1Q8TE96 717 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 GIPC3Q8TF64 312 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 NDRG1Q92597 394 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 C18orf25Q96B23 403 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 TMEM186Q96B77 213 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SLC25A36Q96CQ1 311 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SDSLQ96GA7 329 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 MBOAT7Q96N66 472 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SPXQ9BT56 116 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 CRNKL1Q9BZJ0 848 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 XPO4Q9C0E2 1151 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 ASCL3Q9NQ33 180 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 SAMD4AQ9UPU9 718 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 TNRC6AQ8NDV7 1962 aaKnown RBP2.99□□□□□ -1.93
ITGB1-214ENST00000488427 MYO7BQ6PIF6 2116 aa2.99□□□□□ -1.93
ITGB1-214ENST00000488427 WI2-2373I1.2A0A1W2PRP0 233 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 TRIM64A6NGJ6 449 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 TRIM64BA6NI03 449 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 EMC8O43402 210 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 JCHAINP01591 159 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 SLC4A1P02730 911 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 UQCRFS1P1P0C7P4 283 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 GSTT2P0CG29 244 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 GSTT2BP0CG30 244 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 NR2C1P13056 603 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 PRG2P13727 222 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 STMN1P16949 149 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 PTBP1P26599 531 aaKnown RBP eCLIP2.98□□□□□ -1.93
ITGB1-214ENST00000488427 PRDX2P32119 198 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 ASMTP46597 345 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 HTR5AP47898 357 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 ACADVLP49748 655 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 OTUD4Q01804 1114 aaKnown RBP2.98□□□□□ -1.93
ITGB1-214ENST00000488427 AP1B1Q10567 949 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 DNAJC3Q13217 504 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 PDIA5Q14554 519 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 ELAVL3Q14576 367 aaKnown RBP2.98□□□□□ -1.93
ITGB1-214ENST00000488427 MARCH8Q5T0T0 291 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 PNCKQ6P2M8 343 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 FAM228AQ86W67 206 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 GMCL1P1Q8NEA9 526 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 FAM71CQ8NEG0 241 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 BBS1Q8NFJ9 593 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 FCGR1BQ92637 280 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 MARC2Q969Z3 335 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 C14orf79Q96F83 325 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 DHTKD1Q96HY7 919 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-214ENST00000488427 SPATA13Q96N96 652 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 P2RY13Q9BPV8 354 aa2.98□□□□□ -1.93
ITGB1-214ENST00000488427 LZTS2Q9BRK4 669 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms