RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GPRIN2O60269 458 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 P2RY4P51582 365 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 ELOA3BQ3SY89 546 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 HIKESHIQ53FT3 197 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 ZNF311Q5JNZ3 666 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 PRAMEF8Q5VWM4 474 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 PRAMEF7Q5VXH5 474 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 CREB3L2Q70SY1 520 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 SERPINA11Q86U17 422 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 HIPK1Q86Z02 1210 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 ZNF525Q8N782 197 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 ELOA3Q8NG57 546 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 STK35Q8TDR2 534 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 C3orf49Q96BT1 292 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 BOD1Q96IK1 185 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 ATP6V1G3Q96LB4 118 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 VIPAS39Q9H9C1 493 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 OBP2BQ9NPH6 170 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 RASD1Q9Y272 281 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 CHST2Q9Y4C5 530 aa14.99□□□□□ -0.01
SMC4-216ENST00000485645 A0A096LNT2 108 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 OR6C65A6NJZ3 312 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 ZNF587BE7ETH6 402 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 ATP6V1G2-DDX39BF2Z307 99 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 CLIC1O00299 241 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 NPIPB7O75200 414 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 AHSA1O95433 338 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 SLC25A16P16260 332 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 PAX7P23759 505 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 SELENOPP49908 381 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 LOXL1Q08397 574 aaPredicted RBP14.98□□□□□ -0.01
SMC4-216ENST00000485645 RGNQ15493 299 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 HMBOX1Q6NT76 420 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 NIPAL3Q6P499 406 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 MFSD8Q8NHS3 518 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 SPATA3Q8NHX4 192 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 FAM168AQ92567 244 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 GTF2H4Q92759 462 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 TNFRSF13CQ96RJ3 184 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 RAD21L1Q9H4I0 556 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 MOKQ9UQ07 419 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 PCDHB14Q9Y5E9 798 aa14.98□□□□□ -0.01
SMC4-216ENST00000485645 FBN1P35555 2871 aaKnown RBP14.97□□□□□ -0.01
SMC4-216ENST00000485645 TMEM229AB2RXF0 380 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 LGI1O95970 557 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 IFNA2P01563 188 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 NUDT7P0C024 238 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 EFNA4P52798 201 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 UBE2NP61088 152 aaKnown RBP14.97□□□□□ -0.01
SMC4-216ENST00000485645 FADDQ13158 208 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 TMEM249Q2WGJ8 235 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 TBRG1Q3YBR2 411 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 PODNL1Q6PEZ8 512 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 EPHX4Q8IUS5 362 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 OR1K1Q8NGR3 316 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 BBS10Q8TAM1 723 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 SLC35B4Q969S0 331 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 SLC25A36Q96CQ1 311 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 FBXO17Q96EF6 278 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 ALKBH3Q96Q83 286 aaPredicted RBP14.97□□□□□ -0.01
SMC4-216ENST00000485645 KCNS3Q9BQ31 491 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 PAIP1Q9H074 479 aaKnown RBP14.97□□□□□ -0.01
SMC4-216ENST00000485645 BCL2L10Q9HD36 194 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 A4GALTQ9NPC4 353 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 RPS6KB2Q9UBS0 482 aa14.97□□□□□ -0.01
SMC4-216ENST00000485645 IGHV1-18A0A0C4DH31 117 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 C5orf58C9J3I9 102 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 CSF3P09919 207 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 GTF2E2P29084 291 aaKnown RBP14.96□□□□□ -0.01
SMC4-216ENST00000485645 RPS5P46782 204 aaKnown RBP14.96□□□□□ -0.01
SMC4-216ENST00000485645 STX1BP61266 288 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 HOXC5Q00444 222 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 LGALS3BPQ08380 585 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 CHRFAM7AQ494W8 412 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 TTMPQ5BVD1 217 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 C6orf52Q5T4I8 152 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 ARFGEF3Q5TH69 2177 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 SLC2A7Q6PXP3 512 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 EPGNQ6UW88 154 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 MAL2Q969L2 176 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 ZNF317Q96PQ6 595 aaPredicted RBP14.96□□□□□ -0.01
SMC4-216ENST00000485645 SLC38A2Q96QD8 506 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 USH1CQ9Y6N9 552 aa14.96□□□□□ -0.01
SMC4-216ENST00000485645 YLPM1P49750 1951 aaKnown RBP14.95□□□□□ -0.02
SMC4-216ENST00000485645 FTCDNL1E5RQL4 147 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 UPK3AO75631 287 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 F12P00748 615 aaPredicted RBP14.95□□□□□ -0.02
SMC4-216ENST00000485645 CRYAAP02489 173 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 PNMTP11086 282 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 BMP2P12643 396 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 ETS2P15036 469 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 ZNF43P17038 809 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 VLDLRP98155 873 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 EGR4Q05215 589 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 SWI5Q1ZZU3 235 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 LINGO2Q7L985 606 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 KDM8Q8N371 416 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 GOLGA6L1Q8N7Z2 621 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 C10orf105Q8TEF2 133 aa14.95□□□□□ -0.02
SMC4-216ENST00000485645 PROX1Q92786 737 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms