RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 BCHEP06276 602 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 POLR2JP52435 117 aaKnown RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 MST1LQ2TV78 715 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM249Q2WGJ8 235 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 SLC9B1Q4ZJI4 515 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C6orf52Q5T4I8 152 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 EPHX4Q8IUS5 362 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 CADM2Q8N3J6 435 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 OR1K1Q8NGR3 316 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 FAM168AQ92567 244 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 BCL2L2Q92843 193 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 KATNB1Q9BVA0 655 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 MANSC1Q9H8J5 431 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 CACYBPQ9HB71 228 aaKnown RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 A4GALTQ9NPC4 353 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 YLPM1P49750 1951 aaKnown RBP10□□□□□ -0.81
SCFD1-206ENST00000484733 FTCDNL1E5RQL4 147 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 KLF11O14901 512 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 UBDO15205 165 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 GPRIN2O60269 458 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 KITP10721 976 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 PRG2P13727 222 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 HOXB9P17482 250 aaPredicted RBP10□□□□□ -0.81
SCFD1-206ENST00000484733 BNIP2Q12982 314 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 C6orf89Q6UWU4 347 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 MAVSQ7Z434 540 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 BBS10Q8TAM1 723 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 IGHV1-18A0A0C4DH31 117 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF587BE7ETH6 402 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 ATP6V1G2-DDX39BF2Z307 99 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 RPL36A-HNRNPH2H7BZ11 118 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 NCF2P19878 526 aaPredicted RBP10□□□□□ -0.81
SCFD1-206ENST00000484733 FADDQ13158 208 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 RGNQ15493 299 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 TBRG1Q3YBR2 411 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 CHRFAM7AQ494W8 412 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 MIER2Q8N344 545 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF525Q8N782 197 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 GTF2H4Q92759 462 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 SLC38A2Q96QD8 506 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 PAIP1Q9H074 479 aaKnown RBP10□□□□□ -0.81
SCFD1-206ENST00000484733 FBXO9Q9UK97 447 aaPredicted RBP10□□□□□ -0.81
SCFD1-206ENST00000484733 RCE1Q9Y256 329 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 GMEB1Q9Y692 573 aa10□□□□□ -0.81
SCFD1-206ENST00000484733 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 VWC2LB2RUY7 222 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 NDUFS8O00217 210 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 KRT33AO76009 404 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 PDE5AO76074 875 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 AHSA1O95433 338 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 SH3BGRP55822 239 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-206ENST00000484733 GTDC1Q4AE62 458 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 HIKESHIQ53FT3 197 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF311Q5JNZ3 666 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 RPS26P11Q5JNZ5 115 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-206ENST00000484733 CYB5R2Q6BCY4 276 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 ANKRD16Q6P6B7 361 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 C5orf46Q6UWT4 87 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 SERPINA11Q86U17 422 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 GPAT4Q86UL3 456 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 TLCD1Q96CP7 247 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 OR52B2Q96RD2 323 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 MYOZ1Q9NP98 299 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-206ENST00000484733 NKIRAS1Q9NYS0 192 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 LPAR3Q9UBY5 353 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 CDC42EP3Q9UKI2 254 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 MOKQ9UQ07 419 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 PCDHB14Q9Y5E9 798 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 HEATR1Q9H583 2144 aaKnown RBP9.99□□□□□ -0.81
SCFD1-206ENST00000484733 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 IGLV1-44P01699 117 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 FAM157CP0CG43 387 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 ETS2P15036 469 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 SELENOPP49908 381 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 PDLIM4P50479 330 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 EGR4Q05215 589 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 LINGO2Q7L985 606 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 MGARPQ8TDB4 240 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 NANOS1Q8WY41 292 aaKnown RBP9.99□□□□□ -0.81
SCFD1-206ENST00000484733 OXGR1Q96P68 337 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 ADPRHL2Q9NX46 363 aa9.99□□□□□ -0.81
SCFD1-206ENST00000484733 ABCA1O95477 2261 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 CLIC1O00299 241 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF432O94892 652 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 LGI1O95970 557 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 PNMTP11086 282 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-206ENST00000484733 PRKAR1BP31321 381 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 UBE2NP61088 152 aaKnown RBP9.98□□□□□ -0.81
SCFD1-206ENST00000484733 LSM11P83369 360 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■□□□□ 10
SCFD1-206ENST00000484733 EFNB3Q15768 340 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 LRIF1Q5T3J3 769 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 NIPAL3Q6P499 406 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 DHRS4L2Q6PKH6 230 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 EPGNQ6UW88 154 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 NET1Q7Z628 596 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-206ENST00000484733 LSMEM1Q8N8F7 131 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms